RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 GGCTO75223 188 aaKnown RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 CFDP00746 253 aaPredicted RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 FABP1P07148 127 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 AREGP15514 252 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 NPY1RP25929 384 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 BMI1P35226 326 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 MFAP4P55083 255 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 KRTAP10-3P60369 221 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 RELQ04864 619 aaPredicted RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 SRSF4Q08170 494 aaKnown RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 OXA1LQ15070 435 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 IAH1Q2TAA2 248 aaPredicted RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 C15orf32Q32M92 178 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 Q6ZRM9 215 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 GPHB5Q86YW7 130 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 SLC24A4Q8NFF2 622 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 OR5T1Q8NG75 326 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 OR4D5Q8NGN0 318 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 MARC2Q969Z3 335 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 SMIM8Q96KF7 97 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 GGACTQ9BVM4 153 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 HEYLQ9NQ87 328 aaPredicted RBP6.56□□□□□ -1.36
PDGFC-205ENST00000506880 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 FLVCR2Q9UPI3 526 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 RNF24Q9Y225 148 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 DNHD1Q96M86 4753 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 VWFP04275 2813 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 PKD1L1Q8TDX9 2849 aa6.56□□□□□ -1.36
PDGFC-205ENST00000506880 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 A0A0G2JRQ6 117 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 HMX3A6NHT5 357 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 RLN2P04090 185 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
PDGFC-205ENST00000506880 NUP62P37198 522 aaPredicted RBP6.55□□□□□ -1.36
PDGFC-205ENST00000506880 FAM106AQ4KMX7 169 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 KHDC1LQ5JSQ8 128 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 C10orf55Q5SWW7 151 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 REC114Q7Z4M0 266 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 S100A7AQ86SG5 101 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 ZBTB8BQ8NAP8 495 aaPredicted RBP6.55□□□□□ -1.36
PDGFC-205ENST00000506880 OR1N2Q8NGR9 330 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 OR2K2Q8NGT1 345 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 OR4X1Q8NH49 305 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 ZNF502Q8TBZ5 544 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 ELOVL1Q9BW60 279 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 HINT2Q9BX68 163 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 KLK15Q9H2R5 256 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 C21orf62Q9NYP8 219 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 LINC00527Q9UJ94 153 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 NSG2Q9Y328 171 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 NBEAL1Q6ZS30 2694 aa6.55□□□□□ -1.36
PDGFC-205ENST00000506880 A8MWP6 167 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 I3L2K1 104 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 NUPL2O15504 423 aaKnown RBP6.54□□□□□ -1.36
PDGFC-205ENST00000506880 HOXB5P09067 269 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 MYOD1P15172 320 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 FGL1Q08830 312 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 SLC25A24Q6NUK1 477 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 LCNL1Q6ZST4 164 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 C1QL4Q86Z23 238 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 OR11H1Q8NG94 326 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 OR10W1Q8NGF6 305 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 PFDN2Q9UHV9 154 aa6.54□□□□□ -1.36
PDGFC-205ENST00000506880 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
PDGFC-205ENST00000506880 C5orf51A6NDU8 294 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 K7EIM0 57 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 K7EMT4 169 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 NDUFA4O00483 81 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 OR2J3O76001 311 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 IFNA10P01566 189 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 CD33P20138 364 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 YPEL3P61236 119 aaPredicted RBP6.53□□□□□ -1.36
PDGFC-205ENST00000506880 IL15RAQ13261 267 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 KLF5Q13887 457 aaPredicted RBP6.53□□□□□ -1.36
PDGFC-205ENST00000506880 RPEL1Q2QD12 228 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 NSUN5P1Q3KNT7 163 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 C9orf66Q5T8R8 295 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 OR1S2Q8NGQ3 325 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 PINX1Q96BK5 328 aaKnown RBP6.53□□□□□ -1.36
PDGFC-205ENST00000506880 RAX2Q96IS3 184 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 ZNF436Q9C0F3 470 aaPredicted RBP6.53□□□□□ -1.36
PDGFC-205ENST00000506880 RBKSQ9H477 322 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 TECRQ9NZ01 308 aaKnown RBP6.53□□□□□ -1.36
PDGFC-205ENST00000506880 UFC1Q9Y3C8 167 aa6.53□□□□□ -1.36
PDGFC-205ENST00000506880 C15orf62A8K5M9 175 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 E5RGE8 158 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 OVOL1O14753 267 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 TGOLN2O43493 480 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 SSNA1O43805 119 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 CLN5O75503 358 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 OPRK1P41145 380 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 HBG1P69891 147 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 HBG2P69892 147 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 CD69Q07108 199 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 BAXQ07812 192 aa6.52□□□□□ -1.37
PDGFC-205ENST00000506880 ATP6V1FQ16864 119 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms