RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MFSD2BA6NFX1 497 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 I3L2K1 104 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 CORTO00230 105 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 GOSR2O14653 212 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 SSNA1O43805 119 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 SIX6O95475 246 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 LY86O95711 162 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 MBPP02686 304 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-210ENST00000506767 MYCNOSP40205 109 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 ATP5IP56385 69 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-210ENST00000506767 POLR2GP62487 172 aaKnown RBP eCLIP9.91□□□□□ -0.82
TCOF1-210ENST00000506767 FHL3Q13643 280 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 EXOSC2Q13868 293 aaKnown RBP9.91□□□□□ -0.82
TCOF1-210ENST00000506767 DEFB136Q30KP8 78 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 PRR31Q5SQ13 230 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 CXorf58Q96LI9 332 aa9.91□□□□□ -0.82
TCOF1-210ENST00000506767 CIB3Q96Q77 187 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-210ENST00000506767 RCL1Q9Y2P8 373 aaKnown RBP9.91□□□□□ -0.82
TCOF1-210ENST00000506767 TRBV7-1A0A0A6YYK4 115 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 CCL24O00175 119 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 HSPB1P04792 205 aaKnown RBP9.9□□□□□ -0.82
TCOF1-210ENST00000506767 IAPPP10997 89 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 NPY1RP25929 384 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 PAX9P55771 341 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 H2BFSP57053 126 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 FAM209BQ5JX69 171 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 OR1N2Q8NGR9 330 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 ZNF502Q8TBZ5 544 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 SCARB1Q8WTV0 552 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 EEF1AKMT3Q96AZ1 226 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 MISP3Q96FF7 219 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 CCDC140Q96MF4 163 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 DUX3Q96PT4 197 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 ATP6V0BQ99437 205 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 NMES1Q9C002 83 aa9.9□□□□□ -0.82
TCOF1-210ENST00000506767 PEF1Q9UBV8 284 aaKnown RBP9.9□□□□□ -0.82
TCOF1-210ENST00000506767 IGHV4OR15-8A0A075B7B6 117 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 A0A087WW49 117 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 F8W735 103 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-210ENST00000506767 K7EPK0 472 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 WRBO00258 174 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 TMEM50AO95807 157 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 MT-CO2P00403 227 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 IFNA10P01566 189 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 TRBV12-3P01733 135 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 FCGR2BP31994 310 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-210ENST00000506767 TAS2R30P59541 319 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 ZNF616Q08AN1 781 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 NOXA1Q86UR1 476 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 RNASEH2CQ8TDP1 164 aaKnown RBP9.89□□□□□ -0.83
TCOF1-210ENST00000506767 RAB40CQ96S21 281 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 C11orf1Q9H5F2 150 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 FNDC4Q9H6D8 234 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-210ENST00000506767 RANGRFQ9HD47 186 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-210ENST00000506767 MGAT4CQ9UBM8 478 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 S4R3C0 116 aa9.89□□□□□ -0.83
TCOF1-210ENST00000506767 TRRAPQ9Y4A5 3859 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 IGHV3-21A0A0B4J1V1 117 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 ANKRD34BA5PLL1 514 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 LINC01619G3V211 115 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 SSSCA1O60232 199 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 CXCL3P19876 107 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 RPP30P78346 268 aaKnown RBP9.88□□□□□ -0.83
TCOF1-210ENST00000506767 CYCSP99999 105 aaKnown RBP9.88□□□□□ -0.83
TCOF1-210ENST00000506767 RAB32Q13637 225 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 MLANAQ16655 118 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 LINC00482Q8N8I6 264 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 WFDC9Q8NEX5 89 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 PINX1Q96BK5 328 aaKnown RBP9.88□□□□□ -0.83
TCOF1-210ENST00000506767 WDR89Q96FK6 387 aaPredicted RBP9.88□□□□□ -0.83
TCOF1-210ENST00000506767 OR4C12Q96R67 309 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 MED28Q9H204 178 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 C21orf62Q9NYP8 219 aa9.88□□□□□ -0.83
TCOF1-210ENST00000506767 BMPR1BO00238 502 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 PF4P02776 101 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 CLEC3BP05452 202 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 OR8U8P0C7N1 319 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 RRAS2P62070 204 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-210ENST00000506767 FCN2Q15485 313 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 CLEC19AQ6UXS0 136 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 OR11H7Q8NGC8 314 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 DPF1Q92782 380 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 TXN2Q99757 166 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 PSENENQ9NZ42 101 aa9.87□□□□□ -0.83
TCOF1-210ENST00000506767 LSM5Q9Y4Y9 91 aaKnown RBP9.87□□□□□ -0.83
TCOF1-210ENST00000506767 PMS2P5A8MQ11 134 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 PPP5D1E7EU14 171 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 TSC22D2O75157 780 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 ZP3P21754 424 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 HOXD3P31249 432 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-210ENST00000506767 OPRK1P41145 380 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 MFAP4P55083 255 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 RAB11AP62491 216 aa9.86□□□□□ -0.83
TCOF1-210ENST00000506767 CD69Q07108 199 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms