RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 C8orf86Q6ZUL3 223 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 SLC24A4Q8NFF2 622 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 OR4F17Q8NGA8 305 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 DPF1Q92782 380 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 CXorf58Q96LI9 332 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 FANCD2OSQ96PS1 177 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 OR4F4Q96R69 305 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 PSENENQ9NZ42 101 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 RCL1Q9Y2P8 373 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 S4R3C0 116 aa6.39□□□□□ -1.39
LIMCH1-206ENST00000505705 C2CD3Q4AC94 2353 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 IGLV11-55A0A075B6I3 123 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 TRBV9A0A0B4J1U6 114 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 INS-IGF2F8WCM5 200 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 BRI3O95415 125 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 MT-CO2P00403 227 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 LGALS1P09382 135 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 OR8U8P0C7N1 319 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 NPY1RP25929 384 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 OPRK1P41145 380 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 ID3Q02535 119 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 EXOSC2Q13868 293 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 LRRC37A5PQ49AS3 106 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 Q56UQ5 140 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 C18orf65Q6ZTR6 163 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 ZNF114Q8NC26 417 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 OR11H1Q8NG94 326 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 C4orf3Q8WVX3 66 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 NMES1Q9C002 83 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 GNB4Q9HAV0 340 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 STRAPQ9Y3F4 350 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 PLXNB1O43157 2135 aa6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-206ENST00000505705 TRBV7-1A0A0A6YYK4 115 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 RPS10-NUDT3A0A1W2PQS6 291 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 H3BP45 60 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 K7EPK0 472 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 HSPB1P04792 205 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 RNASE2P10153 161 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 ATP5IP56385 69 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 RRAS2P62070 204 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 RAB32Q13637 225 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 KIAA0141Q14154 515 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 FCN2Q15485 313 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 DEFB136Q30KP8 78 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 C2orf83Q53S99 150 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 FAM209BQ5JX69 171 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 ETFRF1Q6IPR1 90 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 C11orf87Q6NUJ2 197 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 ACSM6Q6P461 480 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 CLEC19AQ6UXS0 136 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 OR1N2Q8NGR9 330 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 DUX3Q96PT4 197 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 RAB40CQ96S21 281 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 RANGRFQ9HD47 186 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 PEF1Q9UBV8 284 aaKnown RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 TET2Q6N021 2002 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-206ENST00000505705 MFSD2BA6NFX1 497 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 LINC01619G3V211 115 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 I3L521 148 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 CCL24O00175 119 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 GNG7O60262 68 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 SCGB2A1O75556 95 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 IGHV3-48P01763 117 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 CLEC3BP05452 202 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 PET100P0DJ07 73 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 ARL3P36405 182 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 MYCNOSP40205 109 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 NPBWR1P48145 328 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 CAV2P51636 162 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 MFAP2P55001 183 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 MFAP4P55083 255 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 H2BFSP57053 126 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 ZNF616Q08AN1 781 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 RPEL1Q2QD12 228 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 ZNF343Q6P1L6 599 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 ETV3LQ6ZN32 361 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 MYOZ3Q8TDC0 251 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 RNASEH2CQ8TDP1 164 aaKnown RBP6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 VN1R17PQ8TDU5 208 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 SCARB1Q8WTV0 552 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 SMIM8Q96KF7 97 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 ZC4H2Q9NQZ6 224 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 DMRT1Q9Y5R6 373 aa6.36□□□□□ -1.39
LIMCH1-206ENST00000505705 IGHV4OR15-8A0A075B7B6 117 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 A0A087WW49 117 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 OR2T8A6NH00 312 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 ADARB2-AS1A8MUL3 147 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 PPP5D1E7EU14 171 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 I3L2K1 104 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 K7EIM0 57 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 NUPL2O15504 423 aaKnown RBP6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 TSC22D2O75157 780 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 CXCL3P19876 107 aa6.35□□□□□ -1.39
LIMCH1-206ENST00000505705 CD33P20138 364 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms