RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 MT-ND6P03923 174 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 AMY1AP04745 511 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 OR5G3P0C626 314 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 RAB7AP51149 207 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 C21orf62-AS1Q17RA5 79 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 WDR73Q6P4I2 378 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 STARD4Q96DR4 205 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 SLC25A33Q9BSK2 321 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 ARL2-SNX15V9GYD0 113 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 PSMB11A5LHX3 300 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 E7EUB6 86 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF883P0CG24 379 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CT45A6P0DMU7 189 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CT45A5P0DMU8 189 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CT45A7P0DMV0 189 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CFHR2P36980 270 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 PRRX1P54821 245 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 PRCDQ00LT1 54 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 Q6ZVH6 145 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 SLC25A2Q9BXI2 301 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF71Q9NQZ8 489 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-206ENST00000505226 UPK2O00526 184 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 SPRY3O43610 288 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 C1orf162Q8NEQ5 155 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-206ENST00000505226 OR2T6Q8NHC8 308 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 C18orf32Q8TCD1 76 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 PLEKHA3Q9HB20 300 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 TANC2Q9HCD6 1990 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 TMEM265A0A087WTH1 108 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 DPRXA6NFQ7 191 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 FNDC10F2Z333 226 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CDX4O14627 284 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-206ENST00000505226 SFTPCP11686 197 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CHRNB4P30926 498 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 POU2AF1Q16633 256 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 COL5A1-AS1Q5SY13 56 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 ITLN1Q8WWA0 313 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 SLC35E1Q96K37 410 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 CLEC7AQ9BXN2 247 aa9.67□□□□□ -0.86
UBE3D-206ENST00000505226 RAI1Q7Z5J4 1906 aaPredicted RBP9.66□□□□□ -0.86
UBE3D-206ENST00000505226 TRAV34A0A0B4J273 112 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 APCSP02743 223 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 LINC00614P0C842 121 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 PYYP10082 97 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 RNASE2P10153 161 aaKnown RBP9.66□□□□□ -0.86
UBE3D-206ENST00000505226 NTF3P20783 257 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 SPACA3Q8IXA5 215 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 C11orf42Q8N5U0 333 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 PLSCR4Q9NRQ2 329 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF355PQ9NSJ1 428 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 DKK4Q9UBT3 224 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 ZFP30Q9Y2G7 519 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 VWC2LB2RUY7 222 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 ITGB1BP1O14713 200 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 IGHV3-48P01763 117 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 TNXAQ16473 311 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 VHLLQ6RSH7 139 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 DEFB108BQ8NET1 73 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 PPP1R35Q8TAP8 253 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 RND1Q92730 232 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 CORO2AQ92828 525 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 SLC25A15Q9Y619 301 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 NAV3Q8IVL0 2385 aa9.66□□□□□ -0.86
UBE3D-206ENST00000505226 A0A1W2PRE2 83 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 IZUMO1RA6ND01 250 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 USF1P22415 310 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-206ENST00000505226 RELQ04864 619 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-206ENST00000505226 PNKDQ8N490 385 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 FDCSPQ8NFU4 85 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 MBD6Q96DN6 1003 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 TUBG2Q9NRH3 451 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 PLCE1Q9P212 2302 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 ADGRG4Q8IZF6 3080 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 NKX2-8O15522 239 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 SIAH2O43255 324 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 HLA-DQA1P01909 254 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 C8orf88P0DMB2 117 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 GPR6P46095 362 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-206ENST00000505226 HES3Q5TGS1 186 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 Q6ZN92 141 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.65□□□□□ -0.86
UBE3D-206ENST00000505226 DNAJC4Q9NNZ3 241 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF257Q9Y2Q1 563 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 MGAQ8IWI9 3026 aa9.65□□□□□ -0.86
UBE3D-206ENST00000505226 A0A1W2PN81 502 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 CRYABP02511 175 aaKnown RBP9.65□□□□□ -0.87
UBE3D-206ENST00000505226 SAA1P0DJI8 122 aaPredicted RBP9.65□□□□□ -0.87
UBE3D-206ENST00000505226 CCL11P51671 97 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 C2orf83Q53S99 150 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF841Q6ZN19 808 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 SEM1Q6ZVN7 128 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 SPATA12Q7Z6I5 190 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 KIR3DL3Q8N743 410 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 UQCR10Q9UDW1 63 aa9.65□□□□□ -0.87
UBE3D-206ENST00000505226 TCF21O43680 179 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 EBLN2Q6P2I7 272 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms