RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CMTM3Q96MX0 182 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 RNF2Q99496 336 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 FAM212BQ9NTI7 297 aaPredicted RBP11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 IGHV7-4-1A0A0J9YVY3 117 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 ELK1P19419 428 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 AKR1C2P52895 323 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 PRCDQ00LT1 54 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 LINC00336Q6ZUF6 198 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
PDLIM7-213ENST00000505074 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 I3L2K1 104 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 IGKV1-39P01597 117 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 IGKV1D-39P04432 117 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PI3P19957 117 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 UCP3P55916 312 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PRR20EP86478 221 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PRR20CP86479 221 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PRR20DP86480 221 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PRR20BP86481 221 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PRR20AP86496 221 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 IZUMO4Q1ZYL8 232 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 RNASE10Q5GAN6 216 aaKnown RBP11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 MZT2AQ6P582 158 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 SLC35G3Q8N808 338 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 TXN2Q99757 166 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 PDCD10Q9BUL8 212 aa11.82□□□□□ -0.52
PDLIM7-213ENST00000505074 TRAV14DV4A0A0A6YYC5 116 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 CHEK1O14757 476 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 IFNA17P01571 189 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 SNCAP37840 140 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 RORCP51449 518 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 PPP5CP53041 499 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 HSPE1P61604 102 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 ZNF124Q15973 351 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 RNF183Q96D59 192 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 NXF2Q9GZY0 626 aaKnown RBP11.81□□□□□ -0.52
PDLIM7-213ENST00000505074 FCGR2BP31994 310 aaPredicted RBP11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 NPBWR1P48145 328 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 PIGPP57054 158 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 RPL11P62913 178 aaKnown RBP11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 TRIM16LQ309B1 348 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 AP3S1Q92572 193 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 MAP6D1Q9H9H5 199 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
PDLIM7-213ENST00000505074 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 ATG12O94817 140 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 HOXA1P49639 335 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 CMC4P56277 68 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 TCF24Q7RTU0 167 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 DUSP18Q8NEJ0 188 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 OR10C1Q96KK4 312 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 TP53RKQ96S44 253 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 COPZ2Q9P299 210 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 EXTL2Q9UBQ6 330 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 KLK11Q9UBX7 282 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
PDLIM7-213ENST00000505074 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 MPTX1A8MV57 137 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 DNASE2O00115 360 aaPredicted RBP11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 CD3DP04234 171 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 RND3P61587 244 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 SCGB2B2Q4G0G5 96 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 OR52I2Q8NH67 350 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
PDLIM7-213ENST00000505074 C3orf85A0A1B0GTC6 90 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 A0A1B0GVY2 172 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 IFNA4P05014 189 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 SUB1P53999 127 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 TCTAP57738 103 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 TOMM20LQ6UXN7 152 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 ZNF600Q6ZNG1 722 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 ARRDC1Q8N5I2 433 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 ST8SIA2Q92186 375 aa11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 RRNAD1Q96FB5 475 aaKnown RBP11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 PUS1Q9Y606 427 aaKnown RBP eCLIP11.77□□□□□ -0.53
PDLIM7-213ENST00000505074 ETV6P41212 452 aa11.76□□□□□ -0.53
PDLIM7-213ENST00000505074 SP6Q3SY56 376 aa11.76□□□□□ -0.53
PDLIM7-213ENST00000505074 ZFAND1Q8TCF1 268 aa11.76□□□□□ -0.53
PDLIM7-213ENST00000505074 ZNF414Q96IQ9 312 aa11.76□□□□□ -0.53
PDLIM7-213ENST00000505074 RARRES2Q99969 163 aa11.76□□□□□ -0.53
PDLIM7-213ENST00000505074 NAA50Q9GZZ1 169 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-213ENST00000505074 TMEM231Q9H6L2 316 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms