RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 MARCH11A6NNE9 402 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 ZNF705EA8MWA4 302 aaPredicted RBP4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 MT-CO2P00403 227 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 IFNA21P01568 189 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 IFNA17P01571 189 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 RLN1P04808 185 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 SPP1P10451 314 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 RAB3BP20337 219 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 G6PCP35575 357 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 EMP1P54849 157 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 POU2AF1Q16633 256 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 UBE2UQ5VVX9 321 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 MORN3Q6PF18 240 aaPredicted RBP4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 Q6ZRM9 215 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 TRPT1Q86TN4 253 aaKnown RBP4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 ZBTB34Q8NCN2 500 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 BEST4Q8NFU0 473 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 TSPAN14Q8NG11 270 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 DGCR14Q96DF8 476 aaKnown RBP4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 OR10C1Q96KK4 312 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 ATP6V0BQ99437 205 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 MGLLQ99685 303 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 NXF2Q9GZY0 626 aaKnown RBP4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 DUSP21Q9H596 190 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 PLEKHA2Q9HB19 425 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 NDUFA4L2Q9NRX3 87 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 TMEM14BQ9NUH8 114 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 COMMD9Q9P000 198 aa4.96□□□□□ -1.62
NPIPB3-203ENST00000504841 AGRNO00468 2067 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TRAV1-2A0A0B4J238 106 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 DBX1A6NMT0 343 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 I3L2K1 104 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 RGS10O43665 173 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 ATP6V1G2O95670 118 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 KRASP01116 189 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 HTN3P15516 51 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 NPY1RP25929 384 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 AQP4P55087 323 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 HERV-K104P61576 105 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 MSMO1Q15800 293 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TMEM41BQ5BJD5 291 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 C22orf42Q6IC83 251 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TOMM20LQ6UXN7 152 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 IZUMO2Q6UXV1 221 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 ZNF818PQ6ZRF7 136 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TPRA1Q86W33 373 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 OR1P1Q8NH06 330 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 MOB3AQ96BX8 217 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TMEM56Q96MV1 263 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 YTHDF1Q9BYJ9 559 aaKnown RBP4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 Q9H521 79 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TMEM231Q9H6L2 316 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 VSIRQ9H7M9 311 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 BLOC1S6Q9UL45 172 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 RAB26Q9ULW5 256 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 PUS1Q9Y606 427 aaKnown RBP eCLIP4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 DNAH6Q9C0G6 4158 aa4.95□□□□□ -1.62
NPIPB3-203ENST00000504841 TRAV2A0A0B4J234 112 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 K7EQG2 157 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 CD5P06127 495 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 FGF2P09038 288 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 LPAR6P43657 344 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 SPINK9Q5DT21 86 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 PSMG4Q5JS54 123 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 C1orf134Q5TEV5 83 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 Q6ZR54 194 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 PRSS48Q7RTY5 328 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 DUSP18Q8NEJ0 188 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 LGALS14Q8TCE9 139 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 FCAMRQ8WWV6 532 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 XCL2Q9UBD3 114 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 DAPK2Q9UIK4 370 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 PRNDQ9UKY0 176 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 VPS13DQ5THJ4 4388 aa4.94□□□□□ -1.62
NPIPB3-203ENST00000504841 TRAV18A0A075B6X5 111 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 IGHV3OR16-12A0A075B7B8 117 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 A0A1B0GU03 582 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 MEIS3P1A6NDR6 274 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 PGLYRP1O75594 196 aaPredicted RBP4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 CDK2AP2O75956 126 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 SCGNO76038 276 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 CD74P04233 296 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 NPPCP23582 126 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 F2RP25116 425 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 GNRHRP30968 328 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 P2RY1P47900 373 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 ZNF600Q6ZNG1 722 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 HOGA1Q86XE5 327 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 CSNK1G2-AS1Q8NCQ2 148 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 METTL26Q96S19 204 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 TXN2Q99757 166 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 SCRT2Q9NQ03 307 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 RHBDL2Q9NX52 303 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 FKBP11Q9NYL4 201 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 EHFQ9NZC4 300 aa4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 RRP15Q9Y3B9 282 aaKnown RBP4.93□□□□□ -1.62
NPIPB3-203ENST00000504841 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms