RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 DPM3Q9P2X0 92 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 FAM96BQ9Y3D0 163 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 RFNGQ9Y644 331 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 SLC25A17O43808 307 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 IFNA4P05014 189 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 CRYGBP07316 175 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
USP17L28-201ENST00000504543 ADCYAP1P18509 176 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
USP17L28-201ENST00000504543 PMS2P11Q13670 270 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 PEA15Q15121 130 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 GUK1Q16774 197 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 CCDC144NLQ6NUI1 221 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 ZNF709Q8N972 641 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
USP17L28-201ENST00000504543 RCC1LQ96I51 464 aaKnown RBP8.14□□□□□ -1.11
USP17L28-201ENST00000504543 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
USP17L28-201ENST00000504543 A0A0U1RQK1 487 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 VENTXO95231 258 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 RNASE2P10153 161 aaKnown RBP8.13□□□□□ -1.11
USP17L28-201ENST00000504543 MYOD1P15172 320 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 OPRK1P41145 380 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 IER3P46695 156 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 DLX1P56177 255 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 ERHP84090 104 aaKnown RBP8.13□□□□□ -1.11
USP17L28-201ENST00000504543 KLRD1Q13241 179 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 MRGPRG-AS1Q2M3A8 158 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 RUSC1-AS1Q66K80 236 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 ACSM6Q6P461 480 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 TREML4Q6UXN2 200 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 MOB3BQ86TA1 216 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 SVBPQ8N300 66 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 ZNF114Q8NC26 417 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 CFHR4Q92496 578 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 HINT2Q9BX68 163 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 NPVFQ9HCQ7 196 aa8.13□□□□□ -1.11
USP17L28-201ENST00000504543 COL6A5A8TX70 2615 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 PLXNB1O43157 2135 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 IGHV3OR16-10A0A075B7F0 116 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 CTXND1A0A1B0GTU2 59 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 F8W036 122 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 TIMM23O14925 209 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 AGPAT2O15120 278 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 APOC3P02656 99 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 SFTA3P0C7M3 94 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 M6PRP20645 277 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 AKR1C1Q04828 323 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 PSG5Q15238 335 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 PRSS8Q16651 343 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 ARSJQ5FYB0 599 aaPredicted RBP8.12□□□□□ -1.11
USP17L28-201ENST00000504543 LDLRAD2Q5SZI1 272 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 SFT2D1Q8WV19 159 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 TMEM231Q9H6L2 316 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 SIGLEC9Q9Y336 463 aa8.12□□□□□ -1.11
USP17L28-201ENST00000504543 IGHV3-72A0A0B4J1Y9 119 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 MAP1LC3B2A6NCE7 125 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 DNAJC9-AS1A6NH13 148 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 CGB1A6NKQ9 187 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 SEC14L6B5MCN3 397 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 NDUFS6O75380 124 aaKnown RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 NDUFA3O95167 84 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 GPX4P36969 197 aaPredicted RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 COMPP49747 757 aaPredicted RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 SUB1P53999 127 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 ELLP55199 621 aaPredicted RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 ACOT6Q3I5F7 207 aaPredicted RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 ZNF506Q5JVG8 444 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 FFAR4Q5NUL3 377 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 PVRIGQ6DKI7 326 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 TEPPQ6URK8 271 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 PPP1R27Q86WC6 154 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 RNASEH2CQ8TDP1 164 aaKnown RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 CACNG8Q8WXS5 425 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 C22orf15Q8WYQ4 148 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 MGST2Q99735 147 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 SRSF8Q9BRL6 282 aaKnown RBP8.11□□□□□ -1.11
USP17L28-201ENST00000504543 GGTLC1Q9BX51 225 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 MAP1LC3BQ9GZQ8 125 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 ESM1Q9NQ30 184 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 TPSG1Q9NRR2 321 aa8.11□□□□□ -1.11
USP17L28-201ENST00000504543 SMCO3A2RU48 225 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 RBFOX3A6NFN3 312 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 IGKV1D-33P01593 117 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 IGKV1-33P01594 117 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 HSPB1P04792 205 aaKnown RBP8.1□□□□□ -1.11
USP17L28-201ENST00000504543 TAGLN2P37802 199 aaKnown RBP8.1□□□□□ -1.11
USP17L28-201ENST00000504543 RPL27AP46776 148 aaKnown RBP8.1□□□□□ -1.11
USP17L28-201ENST00000504543 WT1-ASQ06250 92 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 CD69Q07108 199 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 RAB31Q13636 194 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 TMEM144Q7Z5S9 345 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 RPP25LQ8N5L8 163 aaKnown RBP8.1□□□□□ -1.11
USP17L28-201ENST00000504543 NPBQ8NG41 125 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 OR10G4Q8NGN3 311 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 RITA1Q96K30 269 aa8.1□□□□□ -1.11
USP17L28-201ENST00000504543 ACTR3CQ9C0K3 210 aaPredicted RBP8.1□□□□□ -1.11
USP17L28-201ENST00000504543 EIF5A2Q9GZV4 153 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms