RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 OR9G1Q8NH87 305 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C11orf45Q8TAV5 145 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C2orf15Q8WU43 125 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CT55Q8WUE5 264 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 APOBEC4Q8WW27 367 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 SSMEM1Q8WWF3 244 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 COPS9Q8WXC6 57 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 FRZBQ92765 325 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 FGF14Q92915 247 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MAL2Q969L2 176 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PITX2Q99697 317 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 HSD17B10Q99714 261 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 FOXC2Q99958 501 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 CHCHD5Q9BSY4 110 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ADAT1Q9BUB4 502 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RTL8AQ9BWD3 113 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 MRPL20Q9BYC9 149 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 PRRG4Q9BZD6 226 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 SLC35B3Q9H1N7 401 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TCEAL2Q9H3H9 227 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 C5orf66Q9H5L9 145 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 ISG20L2Q9H9L3 353 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 EDA2RQ9HAV5 297 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 NPVFQ9HCQ7 196 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 RETNQ9HD89 108 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 UBE2TQ9NPD8 197 aaPredicted RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 AIG1Q9NVV5 245 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TXNL4BQ9NX01 149 aaKnown RBP1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 NDUFB11Q9NX14 153 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 THYN1Q9P016 225 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 WASHC3Q9Y3C0 194 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 OR1A2Q9Y585 309 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 INSIG2Q9Y5U4 225 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 LINC00312Q9Y6C7 94 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 R4GN57 208 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
HMGB3P17-201ENST00000504195 TDRD6O60522 2096 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 DOCK1Q14185 1865 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 CCDC88AQ3V6T2 1871 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 PARP14Q460N5 1801 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 XIRP1Q702N8 1843 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SBF2Q86WG5 1849 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 DOCK2Q92608 1830 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ATAD5Q96QE3 1844 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TET3O43151 1660 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ALS2Q96Q42 1657 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM208AQ9UK61 1670 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 KCPQ6ZWJ8 1503 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRBV19A0A075B6N1 114 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV9-1A0A075B6T8 112 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGHV4-30-2A0A087WSY4 118 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRGV10A0A0A0MS01 117 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRBV6-7A0A0A0MS04 114 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TEX48A0A1B0GUV7 120 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 LOC102725191A0A1B0GVB3 256 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SPAARA0A1B0GVQ0 90 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TCRBV9S1A1TA0A576 114 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 MYBPHLA2RUH7 354 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM231BA6NCW3 169 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TLCD2A6NGC4 264 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 RIIAD1A6NNX1 92 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF705FA8MVS1 300 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 H3BMG7 143 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 M0R2P5 195 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 PIRO00625 290 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 XKRYO14609 159 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 UQCRQO14949 82 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 NPIPB7O75200 414 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 HYPMO75409 117 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 UBL3O95164 117 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGHMP01871 453 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRGC2P03986 189 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF705DP0CH99 300 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF705BP0CI00 300 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 CRYGAP11844 174 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 FABP2P12104 132 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 GP1BBP13224 206 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 RPL35AP18077 110 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 COX5AP20674 150 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 NTF3P20783 257 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 BTCP35070 178 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 RBMXP38159 391 aaKnown RBP1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 OPRK1P41145 380 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 MAGEA5P43359 124 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 LPAR6P43657 344 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 H2BFSP57053 126 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 C1QTNF8P60827 252 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 HLA-DRB3P79483 266 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 PLGLB1Q02325 96 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 CATR1Q13166 79 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 GGTLC2Q14390 218 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF146Q15072 292 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 MSMO1Q15800 293 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q499Y3 187 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 SYT14P1Q58G82 188 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 UBE2NLQ5JXB2 153 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 VAX1Q5SQQ9 334 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM182AQ5T1J6 154 aa1.52□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF684Q5T5D7 378 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms