RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 OR13F1Q8NGS4 319 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 NEU1Q99519 415 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 NIPSNAP3BQ9BS92 247 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 YTHDF1Q9BYJ9 559 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 S100A14Q9HCY8 104 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 XCL2Q9UBD3 114 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 LSM2Q9Y333 95 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 SNAPC5O75971 98 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 MT-CO2P00403 227 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 IGHV3-48P01763 117 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 PSMA1P25786 263 aaKnown RBP11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 FGF9P31371 208 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 OR51H1Q8NH63 302 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 NUDCD2Q8WVJ2 157 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 MOB3AQ96BX8 217 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 SLC5A7Q9GZV3 580 aa11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 PUS1Q9Y606 427 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDLIM7-210ENST00000503827 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 MARCH11A6NNE9 402 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 PDCD5O14737 125 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 NPPCP23582 126 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 FCGR2CP31995 323 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 ARPC4P59998 168 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 TMEM88Q6PEY1 159 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 CCDC90BQ9GZT6 254 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 FKBP11Q9NYL4 201 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 DKK2Q9UBU2 259 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 NSG2Q9Y328 171 aa11.21□□□□□ -0.61
PDLIM7-210ENST00000503827 IFITM5A6NNB3 132 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 PPYP01298 95 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 GNG2P59768 71 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 OXA1LQ15070 435 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 KCTD21Q4G0X4 260 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 AADACL3Q5VUY0 350 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 TPRA1Q86W33 373 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 PINX1Q96BK5 328 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-210ENST00000503827 HSMCR30P0CW71 290 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 P2RY1P47900 373 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 NPBWR1P48145 328 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 OR10A3P58181 314 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 FABP5Q01469 135 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 NARS2Q96I59 477 aaKnown RBP11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 RFNGQ9Y644 331 aa11.19□□□□□ -0.62
PDLIM7-210ENST00000503827 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 HELTA6NFD8 242 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNF705FA8MVS1 300 aaPredicted RBP11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 PTGES3LE9PB15 166 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 KRASP01116 189 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 GNAO1P09471 354 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNF705DP0CH99 300 aaPredicted RBP11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNF705BP0CI00 300 aaPredicted RBP11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 EIF2B2P49770 351 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 FXYD4P59646 89 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 DHRS2Q13268 280 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNF818PQ6ZRF7 136 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 CADM3Q8N126 398 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 METTL26Q96S19 204 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 ACOT13Q9NPJ3 140 aa11.18□□□□□ -0.62
PDLIM7-210ENST00000503827 IGHV3OR16-12A0A075B7B8 117 aa11.17□□□□□ -0.62
PDLIM7-210ENST00000503827 A0A1B0GU03 582 aa11.17□□□□□ -0.62
PDLIM7-210ENST00000503827 CASQ2O14958 399 aaPredicted RBP11.17□□□□□ -0.62
PDLIM7-210ENST00000503827 SSX5O60225 188 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 PTHLHP12272 177 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 F2RP25116 425 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 CRYBB3P26998 211 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 G6PCP35575 357 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 TSPAN14Q8NG11 270 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 BORCS5Q969J3 196 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 TSC22D3Q99576 134 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 C8orf4Q9NR00 106 aa11.16□□□□□ -0.62
PDLIM7-210ENST00000503827 TRAV1-2A0A0B4J238 106 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 H3BMM0 161 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 TMEM50AO95807 157 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 RAB3BP20337 219 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 LPAR6P43657 344 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 KRTAP10-2P60368 255 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 SNRPD3P62318 126 aaKnown RBP11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 TMEM17Q86X19 198 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 PACRGLQ8N7B6 248 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 FCAMRQ8WWV6 532 aa11.15□□□□□ -0.62
PDLIM7-210ENST00000503827 DBX1A6NMT0 343 aa11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 SCGNO76038 276 aa11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 MYL9P24844 172 aa11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 AP2S1P53680 142 aaPredicted RBP11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 DAD1P61803 113 aa11.14□□□□□ -0.63
PDLIM7-210ENST00000503827 MLLT11Q13015 90 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms