RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 STAG3L2P0CL84 134 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 STAG3L3P0CL85 134 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 ZNF114Q8NC26 417 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 C12orf57Q99622 126 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 FNDC4Q9H6D8 234 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 HILPDAQ9Y5L2 63 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 DOPEY1Q5JWR5 2465 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 IGHV2-70DA0A0C4DH43 119 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 ACTL6BO94805 426 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 HOXB4P17483 251 aaPredicted RBP17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 CTAG1AP78358 180 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 LCN2P80188 198 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 SSBP2P81877 361 aaPredicted RBP17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 NIPSNAP3BQ9BS92 247 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 FBXL15Q9H469 300 aa17.08■□□□□ 0.33
UBE2D3-216ENST00000503742 MT-ND4LP03901 98 aa17.08■□□□□ 0.32
UBE2D3-216ENST00000503742 PRB1P04280 392 aa17.08■□□□□ 0.32
UBE2D3-216ENST00000503742 MRPL41Q8IXM3 137 aaKnown RBP17.08■□□□□ 0.32
UBE2D3-216ENST00000503742 ABHD5Q8WTS1 349 aa17.08■□□□□ 0.32
UBE2D3-216ENST00000503742 TVP23CQ96ET8 276 aa17.08■□□□□ 0.32
UBE2D3-216ENST00000503742 SLC35E1Q96K37 410 aa17.08■□□□□ 0.32
UBE2D3-216ENST00000503742 C1orf196B1AJZ1 125 aa17.07■□□□□ 0.32
UBE2D3-216ENST00000503742 OR10J1P30954 320 aa17.07■□□□□ 0.32
UBE2D3-216ENST00000503742 OR2T6Q8NHC8 308 aa17.07■□□□□ 0.32
UBE2D3-216ENST00000503742 AKAP6Q13023 2319 aa17.07■□□□□ 0.32
UBE2D3-216ENST00000503742 TEX22C9J3V5 150 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 REG1AP05451 166 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 SPOCK3Q9BQ16 436 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 SEPSECSQ9HD40 501 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 TMEM250H0YL14 139 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 PAGE4O60829 102 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 MEOX2P50222 304 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 PDLIM4P50479 330 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 RHOBP62745 196 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 MINOS1Q5TGZ0 78 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 MINOS1-NBL1R4GNA1 71 aa17.06■□□□□ 0.32
UBE2D3-216ENST00000503742 A0A1W2PRD5 423 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 A0A1W2PRF3 423 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 A0A1W2PRM7 423 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 PCP4L1A6NKN8 68 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 OOSP1A8MZH6 123 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 FCN1O00602 326 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 CXorf1O96002 111 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 ARL14EPLP0DKL9 152 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 AREGP15514 252 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 SPNS3Q6ZMD2 512 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 NPBQ8NG41 125 aa17.05■□□□□ 0.32
UBE2D3-216ENST00000503742 NDUFA3O95167 84 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 MOSP00540 346 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 S100A8P05109 93 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 MFAP2P55001 183 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 SPATA31B1PQ5VZV4 182 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 HIST1H2BAQ96A08 127 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 CCL19Q99731 98 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 COL12A1Q99715 3063 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 SPTAN1Q13813 2472 aaKnown RBP17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 GNB1P62873 340 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 CCDC144NLQ6NUI1 221 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 DYNAPQ8N1N2 210 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 ACY3Q96HD9 319 aa17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 EAF1Q96JC9 268 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-216ENST00000503742 NBR2O15453 112 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 CRYGCP07315 174 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 MMDQ15546 238 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 SSX2Q16385 188 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 THAP8Q8NA92 274 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 OR1P1Q8NH06 330 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 OR4F5Q8NH21 305 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 SRSF12Q8WXF0 261 aaKnown RBP17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 OR4F4Q96R69 305 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 TBX15Q96SF7 602 aa17.03■□□□□ 0.32
UBE2D3-216ENST00000503742 USP9XQ93008 2570 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 FLNCQ14315 2725 aa17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 A0A087WWC5 75 aa17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 GATA2P23769 480 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 C2CD4CQ8TF44 421 aa17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 SDF2L1Q9HCN8 221 aa17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 MRPL36Q9P0J6 103 aaKnown RBP17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 POLR3KQ9Y2Y1 108 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-216ENST00000503742 FOXH1O75593 365 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 TOX4O94842 621 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 PNRC1Q12796 327 aaPredicted RBP17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 PLGLAQ15195 96 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 FBLN7Q53RD9 439 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 CYP2G1PQ6ZSU1 146 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 ZNF843Q8N446 348 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 NPIPB3Q92617 1050 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 SRSF8Q9BRL6 282 aaKnown RBP17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 C19orf24Q9BVV8 132 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 WNK2Q9Y3S1 2297 aa17.02■□□□□ 0.31
UBE2D3-216ENST00000503742 IGKV1D-37A0A075B6S9 117 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 ZNF727A8MUV8 499 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 C11orf94C9JXX5 98 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 SMIM6P0DI80 62 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 FAM78BQ5VT40 261 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 NANPQ8TBE9 248 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 TCEAL7Q9BRU2 100 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 FUT9Q9Y231 359 aa17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 F11RQ9Y624 299 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-216ENST00000503742 MED13LQ71F56 2210 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms