RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 LIPFP07098 398 aa18.08■□□□□ 0.48
PCDH1-204ENST00000503492 NEU4Q8WWR8 484 aaPredicted RBP18.08■□□□□ 0.48
PCDH1-204ENST00000503492 NAV3Q8IVL0 2385 aa18.08■□□□□ 0.48
PCDH1-204ENST00000503492 A0A1W2PPR1 153 aa18.08■□□□□ 0.48
PCDH1-204ENST00000503492 VENTXO95231 258 aa18.08■□□□□ 0.48
PCDH1-204ENST00000503492 REG1AP05451 166 aa18.08■□□□□ 0.48
PCDH1-204ENST00000503492 PNKDQ8N490 385 aa18.08■□□□□ 0.48
PCDH1-204ENST00000503492 RNASEH2CQ8TDP1 164 aaKnown RBP18.08■□□□□ 0.48
PCDH1-204ENST00000503492 SSBP2P81877 361 aaPredicted RBP18.07■□□□□ 0.48
PCDH1-204ENST00000503492 PSG5Q15238 335 aa18.07■□□□□ 0.48
PCDH1-204ENST00000503492 PRSS8Q16651 343 aa18.07■□□□□ 0.48
PCDH1-204ENST00000503492 LY6LH3BQJ8 138 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 CLN5O75503 358 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 SUB1P53999 127 aaKnown RBP eCLIP18.06■□□□□ 0.48
PCDH1-204ENST00000503492 FABP9Q0Z7S8 132 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 LRBAP50851 2863 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 IGLC7A0M8Q6 106 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 DTX2Q86UW9 622 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 MMD2Q8IY49 270 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 RPEQ96AT9 228 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 DOK5Q9P104 306 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 METTL1Q9UBP6 276 aaKnown RBP18.06■□□□□ 0.48
PCDH1-204ENST00000503492 SIGLEC9Q9Y336 463 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 HIVEP3Q5T1R4 2406 aa18.06■□□□□ 0.48
PCDH1-204ENST00000503492 TRBV24-1A0A075B6N3 115 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 SCO2A0A1W2PP80 73 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 PFN1P07737 140 aaKnown RBP18.05■□□□□ 0.48
PCDH1-204ENST00000503492 LDLRAD2Q5SZI1 272 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 AMMECR1Q9Y4X0 333 aaPredicted RBP18.05■□□□□ 0.48
PCDH1-204ENST00000503492 ARHGAP32A7KAX9 2087 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 H7BYZ3 331 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 AP4M1O00189 453 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 MT-CO2P00403 227 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 IGHV3-48P01763 117 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 TNXAQ16473 311 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 LINC01551Q86U37 167 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 NECAP1Q8NC96 275 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 OR5T1Q8NG75 326 aa18.05■□□□□ 0.48
PCDH1-204ENST00000503492 OR5G3P0C626 314 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 ARF6P62330 175 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 ZNF503Q96F45 646 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 TRGC2P03986 189 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 RPL27AP46776 148 aaKnown RBP18.04■□□□□ 0.48
PCDH1-204ENST00000503492 TMEM37Q8WXS4 190 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 NPIPB3Q92617 1050 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 MRPL36Q9P0J6 103 aaKnown RBP18.04■□□□□ 0.48
PCDH1-204ENST00000503492 DCHS2Q6V1P9 2916 aa18.04■□□□□ 0.48
PCDH1-204ENST00000503492 HRNRQ86YZ3 2850 aaPredicted RBP18.03■□□□□ 0.48
PCDH1-204ENST00000503492 ZNF114Q8NC26 417 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 ANAPC16Q96DE5 110 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 C19orf24Q9BVV8 132 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 CHODLQ9H9P2 273 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 AURKAIP1Q9NWT8 199 aaPredicted RBP18.03■□□□□ 0.48
PCDH1-204ENST00000503492 TECRQ9NZ01 308 aaKnown RBP18.03■□□□□ 0.48
PCDH1-204ENST00000503492 TRBV20OR9-2A0A075B6H5 130 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 PSMB11A5LHX3 300 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 HCP5Q6MZN7 132 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 ELOVL1Q9BW60 279 aa18.03■□□□□ 0.48
PCDH1-204ENST00000503492 PGPEP1LA6NFU8 196 aa18.02■□□□□ 0.48
PCDH1-204ENST00000503492 AREGP15514 252 aa18.02■□□□□ 0.48
PCDH1-204ENST00000503492 GALR1P47211 349 aa18.02■□□□□ 0.48
PCDH1-204ENST00000503492 UQCRFS1P47985 274 aa18.02■□□□□ 0.48
PCDH1-204ENST00000503492 SSBP3Q9BWW4 388 aaPredicted RBP18.02■□□□□ 0.48
PCDH1-204ENST00000503492 SPTBN1Q01082 2364 aaKnown RBP18.02■□□□□ 0.48
PCDH1-204ENST00000503492 IGKV1D-37A0A075B6S9 117 aa18.02■□□□□ 0.47
PCDH1-204ENST00000503492 COMPP49747 757 aaPredicted RBP18.02■□□□□ 0.47
PCDH1-204ENST00000503492 MFAP2P55001 183 aa18.02■□□□□ 0.47
PCDH1-204ENST00000503492 APELAP0DMC3 54 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 PVRIGQ6DKI7 326 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 C19orf35Q6ZS72 473 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 PPP1R27Q86WC6 154 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 PYGO2Q9BRQ0 406 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 FBXL15Q9H469 300 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 LOC105371242A0A075B767 164 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 TPTE2P1Q5T6R2 138 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 RUSC1-AS1Q66K80 236 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 THAP8Q8NA92 274 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 ITLN2Q8WWU7 325 aaPredicted RBP18.01■□□□□ 0.47
PCDH1-204ENST00000503492 TMEM167BQ9NRX6 74 aa18.01■□□□□ 0.47
PCDH1-204ENST00000503492 ZNF98A6NK75 572 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BKO60814 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BJP06899 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BOP23527 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BBP33778 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 CDKN1AP38936 164 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BDP58876 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BCP62807 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 ZNF90Q03938 601 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST2H2BEQ16778 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST2H2BFQ5QNW6 126 aaPredicted RBP18■□□□□ 0.47
PCDH1-204ENST00000503492 MORN5Q5VZ52 161 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 PQLC2Q6ZP29 291 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 OR11H6Q8NGC7 330 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BHQ93079 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 OR5B12Q96R08 314 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BNQ99877 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 HIST1H2BMQ99879 126 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 SLC25A33Q9BSK2 321 aa18■□□□□ 0.47
PCDH1-204ENST00000503492 TCRBV4S1A1TA0A5B7 111 aa17.99■□□□□ 0.47
PCDH1-204ENST00000503492 OR7C2O60412 319 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms