RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 ZNF355PQ9NSJ1 428 aa15.23■□□□□ 0.03
LINC01550-201ENST00000499006 PMS2P5A8MQ11 134 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 P2RY1P47900 373 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 RAB9AP51151 201 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 CD300CQ08708 224 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 TCTEX1D4Q5JR98 221 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 NOXA1Q86UR1 476 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 MYOZ3Q8TDC0 251 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 MS4A10Q96PG2 267 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 C19orf24Q9BVV8 132 aa15.22■□□□□ 0.03
LINC01550-201ENST00000499006 FAM24AA6NFZ4 105 aa15.21■□□□□ 0.03
LINC01550-201ENST00000499006 HAX1O00165 279 aa15.21■□□□□ 0.03
LINC01550-201ENST00000499006 CYB5BO43169 146 aa15.21■□□□□ 0.03
LINC01550-201ENST00000499006 PF4V1P10720 104 aa15.21■□□□□ 0.03
LINC01550-201ENST00000499006 KIAA0141Q14154 515 aaPredicted RBP15.21■□□□□ 0.03
LINC01550-201ENST00000499006 AWAT1Q58HT5 328 aa15.21■□□□□ 0.03
LINC01550-201ENST00000499006 LCNL1Q6ZST4 164 aa15.21■□□□□ 0.03
LINC01550-201ENST00000499006 RNASEH2CQ8TDP1 164 aaKnown RBP15.21■□□□□ 0.03
LINC01550-201ENST00000499006 PRSS46E5RG02 174 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 CORTO00230 105 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 OR2J3O76001 311 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 TRGV3P03979 118 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 CAV2P51636 162 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 RAB11AP62491 216 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 RHOGP84095 191 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 TMEM252Q8N6L7 170 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 NECAP1Q8NC96 275 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 DCUN1D4Q92564 292 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 IGSF23A1L1A6 192 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 FAM223BA6NKX1 122 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 I3L2K1 104 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 NDUFB8O95169 186 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 OR8U8P0C7N1 319 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 METTL15P1P0C7V9 234 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 TPPP2P59282 170 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 TMEM65Q6PI78 240 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 FAM223AQ8IWN6 122 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 OR4X2Q8NGF9 303 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 WFDC12Q8WWY7 111 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 TMEM158Q8WZ71 300 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 MISP3Q96FF7 219 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 THYN1Q9P016 225 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 FBXL7Q9UJT9 491 aa15.2■□□□□ 0.02
LINC01550-201ENST00000499006 K7EIM0 57 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 IFNA4P05014 189 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 RPLP1P05386 114 aaKnown RBP15.19■□□□□ 0.02
LINC01550-201ENST00000499006 KRTAP10-3P60369 221 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 DEFA5Q01523 94 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 EXOSC2Q13868 293 aaKnown RBP15.19■□□□□ 0.02
LINC01550-201ENST00000499006 ETV3LQ6ZN32 361 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 HAPLN4Q86UW8 402 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 OR11H4Q8NGC9 324 aa15.19■□□□□ 0.02
LINC01550-201ENST00000499006 FNDC4Q9H6D8 234 aaPredicted RBP15.19■□□□□ 0.02
LINC01550-201ENST00000499006 PAIP2BQ9ULR5 123 aaKnown RBP15.19■□□□□ 0.02
LINC01550-201ENST00000499006 TENM1Q9UKZ4 2725 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 CD28P10747 220 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 ARL16Q0P5N6 197 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 C15orf32Q32M92 178 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 ZNF546Q86UE3 836 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 ZNF491Q8N8L2 437 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 PINX1Q96BK5 328 aaKnown RBP15.18■□□□□ 0.02
LINC01550-201ENST00000499006 USMG5Q96IX5 58 aa15.18■□□□□ 0.02
LINC01550-201ENST00000499006 FXYD6-FXYD2A0A087WZ82 144 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 CST7O76096 145 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 MT-CO2P00403 227 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 C1QBP02746 253 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 OPRK1P41145 380 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 SULT1A1P50225 295 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 EWSR1Q01844 656 aaKnown RBP eCLIP15.17■□□□□ 0.02
LINC01550-201ENST00000499006 CD69Q07108 199 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 MLANAQ16655 118 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 VN1R17PQ8TDU5 208 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 SCARB1Q8WTV0 552 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 SLC25A31Q9H0C2 315 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 TNFSF18Q9UNG2 199 aa15.17■□□□□ 0.02
LINC01550-201ENST00000499006 A0A0G2JLM5 398 aa15.16■□□□□ 0.02
LINC01550-201ENST00000499006 MFSD2BA6NFX1 497 aa15.16■□□□□ 0.02
LINC01550-201ENST00000499006 RPL12P30050 165 aaKnown RBP15.16■□□□□ 0.02
LINC01550-201ENST00000499006 NHLH2Q02577 135 aa15.16■□□□□ 0.02
LINC01550-201ENST00000499006 OR8G2PQ6IF36 304 aa15.16■□□□□ 0.02
LINC01550-201ENST00000499006 AQP10Q96PS8 301 aa15.16■□□□□ 0.02
LINC01550-201ENST00000499006 HMSDA8MTL9 139 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 SCAF4O95104 1147 aaKnown RBP15.15■□□□□ 0.02
LINC01550-201ENST00000499006 GPX4P36969 197 aaPredicted RBP15.15■□□□□ 0.02
LINC01550-201ENST00000499006 ATP5G2Q06055 141 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 BAXQ07812 192 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 STX12Q86Y82 276 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 OR10P1Q8NGE3 313 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 CACNG8Q8WXS5 425 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 CXorf58Q96LI9 332 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 UBE2E2Q96LR5 201 aa15.15■□□□□ 0.02
LINC01550-201ENST00000499006 IGHV3-21A0A0B4J1V1 117 aa15.14■□□□□ 0.01
LINC01550-201ENST00000499006 RNF222A6NCQ9 220 aa15.14■□□□□ 0.01
LINC01550-201ENST00000499006 IGHV3-48P01763 117 aa15.14■□□□□ 0.01
LINC01550-201ENST00000499006 CDX1P47902 265 aaPredicted RBP15.14■□□□□ 0.01
LINC01550-201ENST00000499006 ETFRF1Q6IPR1 90 aa15.14■□□□□ 0.01
LINC01550-201ENST00000499006 C11orf44Q8N8P7 122 aa15.14■□□□□ 0.01
LINC01550-201ENST00000499006 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
LINC01550-201ENST00000499006 HSPB11Q9Y547 144 aa15.14■□□□□ 0.01
LINC01550-201ENST00000499006 RPS10-NUDT3A0A1W2PQS6 291 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms