RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 CRYM-AS1A6NIL9 109 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 I3L2K1 104 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 CDS2O95674 445 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 IFNA17P01571 189 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 C8orf88P0DMB2 117 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 ELLP55199 621 aaPredicted RBP13.84□□□□□ -0.19
HOXD11-202ENST00000498438 GLYATL2Q8WU03 294 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 PDCD10Q9BUL8 212 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 MCUBQ9NWR8 336 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 SCP2D1Q9UJQ7 156 aa13.84□□□□□ -0.19
HOXD11-202ENST00000498438 NDUFA4O00483 81 aa13.83□□□□□ -0.2
HOXD11-202ENST00000498438 MT-CO2P00403 227 aa13.83□□□□□ -0.2
HOXD11-202ENST00000498438 HOXA1P49639 335 aaPredicted RBP13.83□□□□□ -0.2
HOXD11-202ENST00000498438 DHODHQ02127 395 aa13.83□□□□□ -0.2
HOXD11-202ENST00000498438 RBPMSQ93062 196 aaKnown RBP13.83□□□□□ -0.2
HOXD11-202ENST00000498438 PINX1Q96BK5 328 aaKnown RBP13.83□□□□□ -0.2
HOXD11-202ENST00000498438 DAZ1Q9NQZ3 744 aaKnown RBP13.83□□□□□ -0.2
HOXD11-202ENST00000498438 MRPL27Q9P0M9 148 aaKnown RBP13.83□□□□□ -0.2
HOXD11-202ENST00000498438 V9GYH0 126 aa13.83□□□□□ -0.2
HOXD11-202ENST00000498438 IGHV3OR16-8A0A075B7F1 116 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 INS-IGF2F8WCM5 200 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 SCAF4O95104 1147 aaKnown RBP13.82□□□□□ -0.2
HOXD11-202ENST00000498438 IGHV3-48P01763 117 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 CTSGP08311 255 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 FCGR2BP31994 310 aaPredicted RBP13.82□□□□□ -0.2
HOXD11-202ENST00000498438 ETV6P41212 452 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 MFAP4P55083 255 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 HAGHQ16775 308 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 PYDC2Q56P42 97 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 Q6ZRM9 215 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 FAM219AQ8IW50 185 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 SELENOHQ8IZQ5 122 aaKnown RBP13.82□□□□□ -0.2
HOXD11-202ENST00000498438 DEFB125Q8N687 156 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 TRIM63Q969Q1 353 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 TMEM230Q96A57 120 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 C20orf24Q9BUV8 137 aa13.82□□□□□ -0.2
HOXD11-202ENST00000498438 GAR1Q9NY12 217 aaKnown RBP13.82□□□□□ -0.2
HOXD11-202ENST00000498438 S100A5P33763 92 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 SNCAP37840 140 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 KLF9Q13886 244 aaPredicted RBP13.81□□□□□ -0.2
HOXD11-202ENST00000498438 TMEM268Q5VZI3 342 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 SLC16A13Q7RTY0 426 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 ZNF414Q96IQ9 312 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 TXN2Q99757 166 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 ENY2Q9NPA8 101 aa13.81□□□□□ -0.2
HOXD11-202ENST00000498438 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 NUPL2O15504 423 aaKnown RBP13.8□□□□□ -0.2
HOXD11-202ENST00000498438 ZNF207O43670 478 aaKnown RBP13.8□□□□□ -0.2
HOXD11-202ENST00000498438 RNASE2P10153 161 aaKnown RBP13.8□□□□□ -0.2
HOXD11-202ENST00000498438 RELQ04864 619 aaPredicted RBP13.8□□□□□ -0.2
HOXD11-202ENST00000498438 ZNF79Q15937 498 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 AARDQ4LEZ3 155 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 RBPMS2Q6ZRY4 209 aaKnown RBP13.8□□□□□ -0.2
HOXD11-202ENST00000498438 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 SRD5A3Q9H8P0 318 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 PRR13Q9NZ81 148 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 CACNG5Q9UF02 275 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 TMEM56-RWDD3S4R434 201 aa13.8□□□□□ -0.2
HOXD11-202ENST00000498438 KMT2CQ8NEZ4 4911 aaKnown RBP13.8□□□□□ -0.2
HOXD11-202ENST00000498438 TRAV25A0A0B4J276 109 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 ZNF701M0R085 212 aaPredicted RBP13.79□□□□□ -0.2
HOXD11-202ENST00000498438 FAUP35544 74 aaKnown RBP13.79□□□□□ -0.2
HOXD11-202ENST00000498438 TMEM187Q14656 261 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 CCDC190Q86UF4 302 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 GPR146Q96CH1 333 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 GALNT14Q96FL9 552 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 SPATA25Q9BR10 227 aa13.79□□□□□ -0.2
HOXD11-202ENST00000498438 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.79□□□□□ -0.2
HOXD11-202ENST00000498438 NBEAL2Q6ZNJ1 2754 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 K7EMT4 169 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 GNG7O60262 68 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 AKR1C4P17516 323 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 SUB1P53999 127 aaKnown RBP eCLIP13.78□□□□□ -0.2
HOXD11-202ENST00000498438 AP3S2P59780 193 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 SPCS3P61009 180 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 PVRIGQ6DKI7 326 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 LINC00322Q6ZN03 302 aaPredicted RBP13.78□□□□□ -0.2
HOXD11-202ENST00000498438 TOMM5Q8N4H5 51 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 OR52E5Q8NH55 327 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 KCNIP3Q9Y2W7 256 aa13.78□□□□□ -0.2
HOXD11-202ENST00000498438 RBMY1BA6NDE4 496 aaKnown RBP13.77□□□□□ -0.21
HOXD11-202ENST00000498438 RBMY1EA6NEQ0 496 aaKnown RBP13.77□□□□□ -0.21
HOXD11-202ENST00000498438 YIF1AO95070 293 aa13.77□□□□□ -0.21
HOXD11-202ENST00000498438 RBMY1DP0C7P1 496 aaKnown RBP13.77□□□□□ -0.21
HOXD11-202ENST00000498438 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.21
HOXD11-202ENST00000498438 ANKRD55Q3KP44 614 aa13.77□□□□□ -0.21
HOXD11-202ENST00000498438 DUSP18Q8NEJ0 188 aa13.77□□□□□ -0.21
HOXD11-202ENST00000498438 IL22RA2Q969J5 263 aa13.77□□□□□ -0.21
HOXD11-202ENST00000498438 CORTO00230 105 aa13.76□□□□□ -0.21
HOXD11-202ENST00000498438 NPBWR1P48145 328 aa13.76□□□□□ -0.21
HOXD11-202ENST00000498438 BSXQ3C1V8 233 aa13.76□□□□□ -0.21
HOXD11-202ENST00000498438 OR10C1Q96KK4 312 aa13.76□□□□□ -0.21
HOXD11-202ENST00000498438 SPAG8Q99932 426 aaPredicted RBP13.76□□□□□ -0.21
HOXD11-202ENST00000498438 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
HOXD11-202ENST00000498438 TSPAN4O14817 238 aa13.75□□□□□ -0.21
HOXD11-202ENST00000498438 NXPH3O95157 252 aa13.75□□□□□ -0.21
HOXD11-202ENST00000498438 OPRK1P41145 380 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms