RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 OR9G4Q8NGQ1 327 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 VN1R17PQ8TDU5 208 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 S100ZQ8WXG8 99 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 PDCD10Q9BUL8 212 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-208ENST00000497892 CACNG5Q9UF02 275 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 SHPKQ9UHJ6 478 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 S4R3C0 116 aa8.6□□□□□ -1.03
ERCC8-208ENST00000497892 PLA2G10O15496 165 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 SAP30O75446 220 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 IFNA17P01571 189 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 IGHV3-23P01764 117 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 VAMP1P23763 118 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 SYNJ2BPP57105 145 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 UBE2MP61081 183 aaKnown RBP8.59□□□□□ -1.03
ERCC8-208ENST00000497892 PPP1R1AQ13522 171 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 SLC25A24Q6NUK1 477 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 CLEC19AQ6UXS0 136 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 LYZL2Q7Z4W2 148 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 LGI3Q8N145 548 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 LRTM2Q8N967 370 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 OR52E5Q8NH55 327 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 ZNF502Q8TBZ5 544 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 GPR146Q96CH1 333 aa8.59□□□□□ -1.03
ERCC8-208ENST00000497892 ZMAT5Q9UDW3 170 aaKnown RBP8.59□□□□□ -1.03
ERCC8-208ENST00000497892 DUXBA0A1W2PPF3 345 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 K7EIM0 57 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 LYRM1O43325 122 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 GGCTO75223 188 aaKnown RBP8.58□□□□□ -1.04
ERCC8-208ENST00000497892 SFT2D2O95562 160 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 SULT1A3P0DMM9 295 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 SULT1A4P0DMN0 295 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 GPR183P32249 361 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 ARL3P36405 182 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 HOXA1P49639 335 aaPredicted RBP8.58□□□□□ -1.04
ERCC8-208ENST00000497892 SPCS3P61009 180 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 ERHP84090 104 aaKnown RBP8.58□□□□□ -1.04
ERCC8-208ENST00000497892 ANKRD55Q3KP44 614 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 SCARB1Q8WTV0 552 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 ATP6V0BQ99437 205 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 ELOVL1Q9BW60 279 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
ERCC8-208ENST00000497892 KRTAP4-8A0A0G2JLE6 195 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 HLA-AP01891 365 aaKnown RBP8.57□□□□□ -1.04
ERCC8-208ENST00000497892 CLEC3BP05452 202 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
ERCC8-208ENST00000497892 SNCAP37840 140 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 SMCO1Q147U7 214 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 TATDN3Q17R31 274 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 BSXQ3C1V8 233 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 PVRIGQ6DKI7 326 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 IL34Q6ZMJ4 242 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 GPHB5Q86YW7 130 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 OR4C12Q96R67 309 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 WDR12Q9GZL7 423 aaKnown RBP8.57□□□□□ -1.04
ERCC8-208ENST00000497892 ENY2Q9NPA8 101 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 C21orf62Q9NYP8 219 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 PEMTQ9UBM1 199 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 FLVCR2Q9UPI3 526 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 SORL1Q92673 2214 aa8.57□□□□□ -1.04
ERCC8-208ENST00000497892 TGP01266 2768 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 WI2-2373I1.2A0A1W2PRP0 233 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 C9orf170A2RU37 121 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 A8MWP6 167 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 I3L2K1 104 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 K7EIL1 84 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 LGALS9O00182 355 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 TGOLN2O43493 480 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 OR2C1O95371 312 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 IGLV1-51P01701 117 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 FCGR2BP31994 310 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-208ENST00000497892 DHRS2Q13268 280 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 ZNF846Q147U1 533 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 MISP3Q96FF7 219 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 BSCL2Q96G97 398 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-208ENST00000497892 C20orf85Q9H1P6 137 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 HSPB7Q9UBY9 170 aa8.56□□□□□ -1.04
ERCC8-208ENST00000497892 ZNF256Q9Y2P7 627 aaPredicted RBP8.56□□□□□ -1.04
ERCC8-208ENST00000497892 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 A0A1B0GU03 582 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 OR2T8A6NH00 312 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 CORTO00230 105 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 NXPH3O95157 252 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 MT-CO2P00403 227 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 CSN3P07498 182 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 OR4E1P0C645 316 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 SLC25A6P12236 298 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 ANXA7P20073 488 aaKnown RBP8.55□□□□□ -1.04
ERCC8-208ENST00000497892 SUB1P53999 127 aaKnown RBP eCLIP8.55□□□□□ -1.04
ERCC8-208ENST00000497892 TNFRSF9Q07011 255 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 SPSB3Q6PJ21 355 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 PLET1Q6UQ28 207 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 LYG2Q86SG7 212 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 HAPLN4Q86UW8 402 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 MRAPQ8TCY5 172 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 HEYLQ9NQ87 328 aaPredicted RBP8.55□□□□□ -1.04
ERCC8-208ENST00000497892 ZC4H2Q9NQZ6 224 aa8.55□□□□□ -1.04
ERCC8-208ENST00000497892 GAR1Q9NY12 217 aaKnown RBP8.55□□□□□ -1.04
ERCC8-208ENST00000497892 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms