RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 KISS1Q15726 138 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 MIR17HGQ75NE6 70 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 C20orf196Q8IYI0 205 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 LRRC25Q8N386 305 aaPredicted RBP0.84□□□□□ -2.27
PSPC1-205ENST00000497722 DCUN1D1Q96GG9 259 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 OR52E6Q96RD3 313 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 CMTM6Q9NX76 183 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 GUCA1BQ9UMX6 200 aa0.84□□□□□ -2.27
PSPC1-205ENST00000497722 SMARCA4P51532 1647 aa0.84□□□□□ -2.28
PSPC1-205ENST00000497722 CCDC88AQ3V6T2 1871 aa0.84□□□□□ -2.28
PSPC1-205ENST00000497722 M0R036 132 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 S100A4P26447 101 aaKnown RBP0.83□□□□□ -2.28
PSPC1-205ENST00000497722 ZNF93P35789 620 aaPredicted RBP0.83□□□□□ -2.28
PSPC1-205ENST00000497722 SULT1A1P50225 295 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 HIST3H3Q16695 136 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 CDKL4Q5MAI5 379 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 SFXN4Q6P4A7 337 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 DEFB128Q7Z7B8 93 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 LINC00311Q8N616 119 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 OR5A1Q8NGJ0 315 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 SLC35B4Q969S0 331 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 IMP4Q96G21 291 aaKnown RBP0.83□□□□□ -2.28
PSPC1-205ENST00000497722 ACER3Q9NUN7 267 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 FBXL12Q9NXK8 326 aa0.83□□□□□ -2.28
PSPC1-205ENST00000497722 RALGAPA2Q2PPJ7 1873 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 BRWD1Q9NSI6 2320 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 IGKV1D-42A0A075B6H8 117 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 TGIF2-C20orf24A0A0A6YYL0 155 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 DPRXA6NFQ7 191 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 SULT1B1O43704 296 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 HYPMO75409 117 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 TCL1BO95988 128 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 IFNA5P01569 189 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 CRYGAP11844 174 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 RHEBQ15382 184 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 TRAPPC6BQ86SZ2 158 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 KRT222Q8N1A0 295 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 HIST3H2BBQ8N257 126 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 OR13C4Q8NGS5 318 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 CCDC90BQ9GZT6 254 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 C11orf68Q9H3H3 251 aaKnown RBP0.82□□□□□ -2.28
PSPC1-205ENST00000497722 ERGIC3Q9Y282 383 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 HEATR5AQ86XA9 2040 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 KIF13BQ9NQT8 1826 aa0.82□□□□□ -2.28
PSPC1-205ENST00000497722 MICAL3Q7RTP6 2002 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 CLDN25C9JDP6 229 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 PIRO00625 290 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 PROSCO94903 275 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 HIST1H1EP10412 219 aaKnown RBP0.81□□□□□ -2.28
PSPC1-205ENST00000497722 MGST1P10620 155 aaKnown RBP0.81□□□□□ -2.28
PSPC1-205ENST00000497722 DEFA1P59665 94 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 RAB4BP61018 213 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 SNRPD2P62316 118 aaKnown RBP0.81□□□□□ -2.28
PSPC1-205ENST00000497722 ZNF826PQ6ZT77 177 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 TOMM6Q96B49 74 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 PKIGQ9Y2B9 76 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 DLG5Q8TDM6 1919 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 RIC1Q4ADV7 1423 aa0.81□□□□□ -2.28
PSPC1-205ENST00000497722 MAST2Q6P0Q8 1798 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 TRAV1-1A0A0B4J248 108 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 EXOC1LA0A1B0GW35 172 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 OR2B3O76000 313 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 AHSA1O95433 338 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 IGKV1-5P01602 117 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 NKX2-5P52952 324 aaPredicted RBP0.8□□□□□ -2.28
PSPC1-205ENST00000497722 RNASE10Q5GAN6 216 aaKnown RBP0.8□□□□□ -2.28
PSPC1-205ENST00000497722 Q6ZQT0 140 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 PFN4Q8NHR9 129 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 H1FXQ92522 213 aaKnown RBP0.8□□□□□ -2.28
PSPC1-205ENST00000497722 PPP1R2P1Q96PQ5 205 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 NIPSNAP1Q9BPW8 284 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 CMSS1Q9BQ75 279 aaKnown RBP0.8□□□□□ -2.28
PSPC1-205ENST00000497722 PARVGQ9HBI0 331 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 OSTCQ9NRP0 149 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 TAS2R4Q9NYW5 299 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 VPS29Q9UBQ0 182 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 SLC35A3Q9Y2D2 325 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 TMEM56-RWDD3S4R434 201 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 DIDO1Q9BTC0 2240 aaKnown RBP0.8□□□□□ -2.28
PSPC1-205ENST00000497722 SNAPC4Q5SXM2 1469 aa0.8□□□□□ -2.28
PSPC1-205ENST00000497722 ANAPC1Q9H1A4 1944 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 MED12LQ86YW9 2145 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.79□□□□□ -2.28
PSPC1-205ENST00000497722 GOLGA6L19H0YKK7 550 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 FAAHO00519 579 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 OR1I1O60431 355 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 UBL3O95164 117 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 CLPSP04118 112 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 IFNA16P05015 189 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 CTSDP07339 412 aaPredicted RBP0.79□□□□□ -2.28
PSPC1-205ENST00000497722 BAALC-AS2P0C853 105 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 COX6A1P12074 109 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 RNASE3P12724 160 aaKnown RBP0.79□□□□□ -2.28
PSPC1-205ENST00000497722 RPL5P46777 297 aaKnown RBP0.79□□□□□ -2.28
PSPC1-205ENST00000497722 OMPP47874 163 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 CEBPGP53567 150 aa0.79□□□□□ -2.28
PSPC1-205ENST00000497722 RHOBP62745 196 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms