RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 IGHV3-35A0A0C4DH35 117 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 IFNA17P01571 189 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 AP3S2P59780 193 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 TM4SF20Q53R12 229 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 SPINK9Q5DT21 86 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 TOMM5Q8N4H5 51 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 SLC35G3Q8N808 338 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 UXS1Q8NBZ7 420 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 DEDD2Q8WXF8 326 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 TMEM190Q8WZ59 177 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 MISP3Q96FF7 219 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 TXN2Q99757 166 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 PDCD10Q9BUL8 212 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 GAR1Q9NY12 217 aaKnown RBP14.09□□□□□ -0.15
RPN1-208ENST00000497415 MRPL27Q9P0M9 148 aaKnown RBP14.09□□□□□ -0.15
RPN1-208ENST00000497415 MLXQ9UH92 298 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 KCNIP3Q9Y2W7 256 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 UFC1Q9Y3C8 167 aa14.09□□□□□ -0.15
RPN1-208ENST00000497415 NDUFA4O00483 81 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 MT-CO2P00403 227 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 CTSGP08311 255 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 FAUP35544 74 aaKnown RBP14.08□□□□□ -0.16
RPN1-208ENST00000497415 TMEM187Q14656 261 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 Q56UQ5 140 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 TMEM268Q5VZI3 342 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 OR52E5Q8NH55 327 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 RNASE11Q8TAA1 199 aaKnown RBP14.08□□□□□ -0.16
RPN1-208ENST00000497415 IL22RA2Q969J5 263 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 ZNF414Q96IQ9 312 aa14.08□□□□□ -0.16
RPN1-208ENST00000497415 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.08□□□□□ -0.16
RPN1-208ENST00000497415 SNCAP37840 140 aa14.07□□□□□ -0.16
RPN1-208ENST00000497415 MFAP4P55083 255 aa14.07□□□□□ -0.16
RPN1-208ENST00000497415 ZNF57Q68EA5 555 aaPredicted RBP14.07□□□□□ -0.16
RPN1-208ENST00000497415 GPR146Q96CH1 333 aa14.07□□□□□ -0.16
RPN1-208ENST00000497415 WWC2-AS2Q96NR7 200 aa14.07□□□□□ -0.16
RPN1-208ENST00000497415 RNASE2P10153 161 aaKnown RBP14.06□□□□□ -0.16
RPN1-208ENST00000497415 SPCS3P61009 180 aa14.06□□□□□ -0.16
RPN1-208ENST00000497415 SUPT4H1P63272 117 aaKnown RBP14.06□□□□□ -0.16
RPN1-208ENST00000497415 SPANXN2Q5MJ10 180 aa14.06□□□□□ -0.16
RPN1-208ENST00000497415 TMEM61Q8N0U2 210 aa14.06□□□□□ -0.16
RPN1-208ENST00000497415 UBAC2Q8NBM4 344 aa14.06□□□□□ -0.16
RPN1-208ENST00000497415 WDR89Q96FK6 387 aaPredicted RBP14.06□□□□□ -0.16
RPN1-208ENST00000497415 SRRQ9GZT4 340 aa14.06□□□□□ -0.16
RPN1-208ENST00000497415 CACNG5Q9UF02 275 aa14.06□□□□□ -0.16
RPN1-208ENST00000497415 K7EMT4 169 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 AKR1C4P17516 323 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 HOXA1P49639 335 aaPredicted RBP14.05□□□□□ -0.16
RPN1-208ENST00000497415 SUB1P53999 127 aaKnown RBP eCLIP14.05□□□□□ -0.16
RPN1-208ENST00000497415 CD81P60033 236 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 GUCA2BQ16661 112 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 BSXQ3C1V8 233 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 BTNL8Q6UX41 500 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 NEURL2Q9BR09 285 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 ENY2Q9NPA8 101 aa14.05□□□□□ -0.16
RPN1-208ENST00000497415 DAZ1Q9NQZ3 744 aaKnown RBP14.05□□□□□ -0.16
RPN1-208ENST00000497415 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
RPN1-208ENST00000497415 TRAV25A0A0B4J276 109 aa14.04□□□□□ -0.16
RPN1-208ENST00000497415 NUPL2O15504 423 aaKnown RBP14.04□□□□□ -0.16
RPN1-208ENST00000497415 CD7P09564 240 aa14.04□□□□□ -0.16
RPN1-208ENST00000497415 PINX1Q96BK5 328 aaKnown RBP14.04□□□□□ -0.16
RPN1-208ENST00000497415 TM2D3Q9BRN9 247 aa14.04□□□□□ -0.16
RPN1-208ENST00000497415 PRR13Q9NZ81 148 aa14.04□□□□□ -0.16
RPN1-208ENST00000497415 NDUFA13Q9P0J0 144 aa14.04□□□□□ -0.16
RPN1-208ENST00000497415 SELENOKQ9Y6D0 94 aa14.04□□□□□ -0.16
RPN1-208ENST00000497415 A0A0B4J2A0 478 aa14.03□□□□□ -0.16
RPN1-208ENST00000497415 CORTO00230 105 aa14.03□□□□□ -0.16
RPN1-208ENST00000497415 IGHV3-48P01763 117 aa14.03□□□□□ -0.16
RPN1-208ENST00000497415 RELQ04864 619 aaPredicted RBP14.03□□□□□ -0.16
RPN1-208ENST00000497415 LINC00322Q6ZN03 302 aaPredicted RBP14.03□□□□□ -0.16
RPN1-208ENST00000497415 SLC25A21Q9BQT8 299 aaPredicted RBP14.03□□□□□ -0.16
RPN1-208ENST00000497415 SHPKQ9UHJ6 478 aa14.03□□□□□ -0.16
RPN1-208ENST00000497415 C15orf62A8K5M9 175 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 GNG7O60262 68 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 NPBWR1P48145 328 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 SRPXP78539 464 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 TMEM128Q5BJH2 165 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 NMSQ5H8A3 153 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 DUSP18Q8NEJ0 188 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 OR10C1Q96KK4 312 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 RCHY1Q96PM5 261 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 C20orf24Q9BUV8 137 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 TUBA4BQ9H853 241 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 ZMAT4Q9H898 229 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 CACFD1Q9UGQ2 172 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 STAB2Q8WWQ8 2551 aa14.02□□□□□ -0.17
RPN1-208ENST00000497415 SCAF4O95104 1147 aaKnown RBP14.01□□□□□ -0.17
RPN1-208ENST00000497415 SULT1A3P0DMM9 295 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 SULT1A4P0DMN0 295 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 ANXA3P12429 323 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 HTR2BP41595 481 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 BAK1Q16611 211 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 HAGHQ16775 308 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 LYZL2Q7Z4W2 148 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 LGI3Q8N145 548 aa14.01□□□□□ -0.17
RPN1-208ENST00000497415 FNDC4Q9H6D8 234 aaPredicted RBP14.01□□□□□ -0.17
RPN1-208ENST00000497415 IGHV3OR16-8A0A075B7F1 116 aa14□□□□□ -0.17
RPN1-208ENST00000497415 PIGBOS1A0A0B4J2F0 54 aa14□□□□□ -0.17
RPN1-208ENST00000497415 TMEM50AO95807 157 aa14□□□□□ -0.17
RPN1-208ENST00000497415 CCR6P51684 374 aa14□□□□□ -0.17
RPN1-208ENST00000497415 ANKRD55Q3KP44 614 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms