RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 RASL11AQ6T310 242 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 LCA10Q71F78 164 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 NUP35Q8NFH5 326 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 OR13C4Q8NGS5 318 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 STAG3L4Q8TBR4 150 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 MBD3L1Q8WWY6 194 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 GPX7Q96SL4 187 aaPredicted RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 PFDN5Q99471 154 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 SNX12Q9UMY4 172 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 PCNTO95613 3336 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 ZNF407Q9C0G0 2248 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 CD109Q6YHK3 1445 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 IGLV4-60A0A075B6I1 120 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TRAV36DV7A0A075B6V5 113 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 A0A1B0GV90 55 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 ZNF860A6NHJ4 632 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 LEPROTO15243 131 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 C1QCP02747 245 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 BPGMP07738 259 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BOP23527 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 FKBP2P26885 142 aaKnown RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BBP33778 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BDP58876 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BCP62807 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST2H2BEQ16778 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.77□□□□□ -1.97
SNX13-211ENST00000496855 FKBP1CQ5VVH2 108 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 SLC25A34Q6PIV7 304 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 LHFPL1Q86WI0 220 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 ST20-AS1Q8NBB2 130 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 FNDC9Q8TBE3 224 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 ACOT12Q8WYK0 555 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BHQ93079 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 SLAMF6Q96DU3 332 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TSC22D3Q99576 134 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BNQ99877 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 HIST1H2BMQ99879 126 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TMEM133Q9H2Q1 129 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TRAPPC2LQ9UL33 140 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TONSLQ96HA7 1378 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 PLXND1Q9Y4D7 1925 aa2.77□□□□□ -1.97
SNX13-211ENST00000496855 TNRC18O15417 2968 aaPredicted RBP2.76□□□□□ -1.97
SNX13-211ENST00000496855 SOGA1O94964 1423 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 A0A0C4DFX4 3053 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 A0A1B0GX51 115 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 DUXBA0A1W2PPF3 345 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 ARL5CA6NH57 179 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 RFPL4AA6NLU0 287 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 RFPL4AL1F8VTS6 287 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 H3BQ85 93 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 J3KT08 172 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 LY6HO94772 140 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 CSN1S1P47710 185 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 RBM11P57052 281 aaKnown RBP2.76□□□□□ -1.97
SNX13-211ENST00000496855 KLF3P57682 345 aaPredicted RBP2.76□□□□□ -1.97
SNX13-211ENST00000496855 SDIM1Q6ZPB5 146 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 ZNF695Q8IW36 515 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 RPP25LQ8N5L8 163 aaKnown RBP2.76□□□□□ -1.97
SNX13-211ENST00000496855 C2orf50Q96LR7 162 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 TMEM70Q9BUB7 260 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 RNF122Q9H9V4 155 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 ZNF443Q9Y2A4 671 aaPredicted RBP2.76□□□□□ -1.97
SNX13-211ENST00000496855 MED31Q9Y3C7 131 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 FANCD2Q9BXW9 1451 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 PKD1L2Q7Z442 2459 aa2.76□□□□□ -1.97
SNX13-211ENST00000496855 TAF1LQ8IZX4 1826 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 KIAA0556O60303 1618 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 ZCCHC11Q5TAX3 1644 aaKnown RBP2.75□□□□□ -1.97
SNX13-211ENST00000496855 ALKQ9UM73 1620 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 LRRC7Q96NW7 1537 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 BCL9O00512 1426 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 MAST2Q6P0Q8 1798 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 TRAV38-1A0A0B4J264 116 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 IGKV1-9A0A0C4DH69 117 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 A0A1B0GW64 132 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 C17orf98A8MV24 154 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 K7EM74 188 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 M0R378 163 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 PLXNB1O43157 2135 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 SOD1P00441 154 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 APOA2P02652 100 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 IGKV1-16P04430 117 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 HTR1AP08908 422 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 CRHBPP24387 322 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 MPV17P39210 176 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 FOXA1P55317 472 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 SLC38A11Q08AI6 406 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 TMEM69Q5SWH9 247 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 CNEP1R1Q8N9A8 125 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 MUC7Q8TAX7 377 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 WFDC5Q8TCV5 224 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 IMUPQ9GZP8 106 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 AICDAQ9GZX7 198 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 TPT1P8Q9HAU6 139 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 OTORQ9NRC9 128 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 SPANXA1Q9NS26 97 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 RBM7Q9Y580 266 aaKnown RBP2.75□□□□□ -1.97
SNX13-211ENST00000496855 XIRP1Q702N8 1843 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms