RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 RHPN1-AS1Q9BWJ2 59 aa12.58□□□□□ -0.4
APOBEC3A-204ENST00000495988 NXF2Q9GZY0 626 aaKnown RBP12.58□□□□□ -0.4
APOBEC3A-204ENST00000495988 IGHV3-49A0A0A0MS15 119 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 CHEK1O14757 476 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 SPRY2O43597 315 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 IGKV1-5P01602 117 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 TBPP20226 339 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 PPP5CP53041 499 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 Q6ZWC4 215 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 OR10C1Q96KK4 312 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 MTFP1Q9UDX5 166 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 TP53TG1Q9Y2A0 90 aa12.57□□□□□ -0.4
APOBEC3A-204ENST00000495988 DNAH1Q9P2D7 4330 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 TRAV14DV4A0A0A6YYC5 116 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 UBE2CO00762 179 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 ATG12O94817 140 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 BMI1P35226 326 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 SNCAP37840 140 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 TMBIM6P55061 237 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 STPG3Q8N7X2 389 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 SLC35G3Q8N808 338 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 OR4D10Q8NGI6 311 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 C15orf40Q8WUR7 153 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 ABHD1Q96SE0 405 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 COPZ2Q9P299 210 aa12.56□□□□□ -0.4
APOBEC3A-204ENST00000495988 IGHV3OR16-13A0A075B7E8 117 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 IGHV3-74A0A0B4J1X5 117 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 A0A0B4J293 547 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 KIR2DL5BA0A0G2JN68 375 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 KIR2DL5BA0A0G2JPC4 375 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 A0A0J9YWU9 116 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 IFNA17P01571 189 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 TFPI2P48307 235 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 TAS2R19P59542 299 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 TRIM16LQ309B1 348 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 SCGB2B2Q4G0G5 96 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 TMEM229BQ8NBD8 167 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 DUSP18Q8NEJ0 188 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 TERB2Q8NHR7 220 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 GALNT14Q96FL9 552 aa12.55□□□□□ -0.4
APOBEC3A-204ENST00000495988 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 ST8SIA3O43173 380 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 RAB3DO95716 219 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 CD74P04233 296 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 P0C879 139 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 NPBWR1P48145 328 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 SPCS2Q15005 226 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 SP6Q3SY56 376 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 LYG2Q86SG7 212 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 APRG1Q8IVJ8 170 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 OR13C8Q8NGS7 320 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
APOBEC3A-204ENST00000495988 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 CCDC160A6NGH7 325 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 RGS5O15539 181 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 ETV6P41212 452 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 TNFRSF9Q07011 255 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 PMS2P11Q13670 270 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 TOMM20LQ6UXN7 152 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 RNASE11Q8TAA1 199 aaKnown RBP12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 MARCH1Q8TCQ1 289 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 RNF183Q96D59 192 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 MIXL1Q9H2W2 232 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 MAP6D1Q9H9H5 199 aa12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
APOBEC3A-204ENST00000495988 H3BMQ9 156 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 UCP1P25874 307 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 ZNF124Q15973 351 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 FAM90A2PQ658T7 463 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 ZNF600Q6ZNG1 722 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 TCF24Q7RTU0 167 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 GBGT1Q8N5D6 347 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 ENY2Q9NPA8 101 aa12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.41
APOBEC3A-204ENST00000495988 A0A0G2JRQ6 117 aa12.51□□□□□ -0.41
APOBEC3A-204ENST00000495988 CORTO00230 105 aa12.51□□□□□ -0.41
APOBEC3A-204ENST00000495988 B3GALNT1O75752 331 aa12.51□□□□□ -0.41
APOBEC3A-204ENST00000495988 TMEM50AO95807 157 aa12.51□□□□□ -0.41
APOBEC3A-204ENST00000495988 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
APOBEC3A-204ENST00000495988 PVRIGQ6DKI7 326 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms