RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 RPP25LQ8N5L8 163 aaKnown RBP13.07□□□□□ -0.32
CBX4-204ENST00000495122 Q8N7P7 452 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 CLRN3Q8NCR9 226 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 SMCO3A2RU48 225 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 C9JQL5 133 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 CRYGBP07316 175 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 RNASE2P10153 161 aaKnown RBP13.06□□□□□ -0.32
CBX4-204ENST00000495122 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
CBX4-204ENST00000495122 CCL20P78556 96 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 ICAM4Q14773 271 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 IL17RELQ6ZVW7 336 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 TMEM144Q7Z5S9 345 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 PNKDQ8N490 385 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 ZNF114Q8NC26 417 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 C19orf24Q9BVV8 132 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 HINT2Q9BX68 163 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 VSIRQ9H7M9 311 aa13.06□□□□□ -0.32
CBX4-204ENST00000495122 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
CBX4-204ENST00000495122 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
CBX4-204ENST00000495122 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
CBX4-204ENST00000495122 PSMB3P49720 205 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 PAX2Q02962 417 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 DIAPH2-AS1Q14236 149 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 RHEBQ15382 184 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 FAM120AOSQ5T036 256 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 ATRAIDQ6UW56 229 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 SLC35E1Q96K37 410 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 TXNDC17Q9BRA2 123 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 GGTLC1Q9BX51 225 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 ZNF430Q9H8G1 570 aaPredicted RBP13.05□□□□□ -0.32
CBX4-204ENST00000495122 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 ANK2Q01484 3957 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
CBX4-204ENST00000495122 A0A1W2PPI3 338 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 COX7A1P24310 79 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 PAX6P26367 422 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 PSG5Q15238 335 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 PRSS8Q16651 343 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 ARSJQ5FYB0 599 aaPredicted RBP13.04□□□□□ -0.32
CBX4-204ENST00000495122 PVRIGQ6DKI7 326 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 TMEM158Q8WZ71 300 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 MGST2Q99735 147 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 POLR3KQ9Y2Y1 108 aaPredicted RBP13.04□□□□□ -0.32
CBX4-204ENST00000495122 PXMP4Q9Y6I8 212 aa13.04□□□□□ -0.32
CBX4-204ENST00000495122 CORTO00230 105 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 SLC25A17O43808 307 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 FOXH1O75593 365 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 ACTL6BO94805 426 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 TGFAP01135 160 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 IGKV1D-33P01593 117 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 IGKV1-33P01594 117 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 SRD5A1P18405 259 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 ARF6P62330 175 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 CD69Q07108 199 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 ETFRF1Q6IPR1 90 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 GNG13Q9P2W3 67 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 TBL2Q9Y4P3 447 aaKnown RBP13.03□□□□□ -0.32
CBX4-204ENST00000495122 ARHGAP32A7KAX9 2087 aa13.03□□□□□ -0.32
CBX4-204ENST00000495122 IGHV2-70DA0A0C4DH43 119 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 A0A1W2PPV4 95 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 TMEM250H0YL14 139 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 HNF1AP20823 631 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 RPL27AP46776 148 aaKnown RBP13.02□□□□□ -0.33
CBX4-204ENST00000495122 HAGHQ16775 308 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 FAM122CQ6P4D5 195 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 NANPQ8TBE9 248 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 RAB24Q969Q5 203 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 RARRES2Q99969 163 aa13.02□□□□□ -0.33
CBX4-204ENST00000495122 A0A1B0GV50 99 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 MT-CO2P00403 227 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 NPBWR1P48145 328 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 RHOBP62745 196 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PRR20EP86478 221 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PRR20CP86479 221 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PRR20DP86480 221 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PRR20BP86481 221 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PRR20AP86496 221 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PNRC1Q12796 327 aaPredicted RBP13.01□□□□□ -0.33
CBX4-204ENST00000495122 KRTAP24-1Q3LI83 254 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 FAM74A3Q4VXF1 159 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 SSX7Q7RTT5 188 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 SLC35E3Q7Z769 313 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 PPP1R27Q86WC6 154 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 RNF2Q99496 336 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 SIRPDQ9H106 197 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 TUBA4BQ9H853 241 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 SMCO4Q9NRQ5 59 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 ARL2-SNX15V9GYD0 113 aa13.01□□□□□ -0.33
CBX4-204ENST00000495122 B4DEV8 164 aa13□□□□□ -0.33
CBX4-204ENST00000495122 VENTXO95231 258 aa13□□□□□ -0.33
CBX4-204ENST00000495122 MYOD1P15172 320 aa13□□□□□ -0.33
CBX4-204ENST00000495122 B2MP61769 119 aa13□□□□□ -0.33
CBX4-204ENST00000495122 HNF4GQ14541 408 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms