RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 P0DMU3 169 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 SPP1P10451 314 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 NPBWR1P48145 328 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 SCAND1P57086 179 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 IDNKQ5T6J7 187 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 TOMM20LQ6UXN7 152 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 OR4A16Q8NH70 328 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 ZNF414Q96IQ9 312 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 CNBD2Q96M20 576 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 ZNF2Q9BSG1 426 aaPredicted RBP10.34□□□□□ -0.75
VARS-228ENST00000495010 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 AUNIPQ9H7T9 357 aa10.34□□□□□ -0.75
VARS-228ENST00000495010 A0A1W2PS18 150 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 M0R2N4 97 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 APOHP02749 345 aaPredicted RBP10.33□□□□□ -0.76
VARS-228ENST00000495010 PSMB9P28065 219 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 S100GP29377 79 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 ERHP84090 104 aaKnown RBP10.33□□□□□ -0.76
VARS-228ENST00000495010 MXD1Q05195 221 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 ZNF600Q6ZNG1 722 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 FAM24BQ8N5W8 94 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 OR5H6Q8NGV6 325 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 TMEM14BQ9NUH8 114 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
VARS-228ENST00000495010 PUS1Q9Y606 427 aaKnown RBP eCLIP10.33□□□□□ -0.76
VARS-228ENST00000495010 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 DBX1A6NMT0 343 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 GPR31O00270 319 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 SDC2P34741 201 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 DHRS11Q6UWP2 260 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 H2BFWTQ7Z2G1 175 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 TRPT1Q86TN4 253 aaKnown RBP10.32□□□□□ -0.76
VARS-228ENST00000495010 LILRB2Q8N423 598 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 NRG4Q8WWG1 115 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 SLC25A38Q96DW6 304 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 NDUFAF3Q9BU61 184 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 VCX3BQ9H321 246 aa10.32□□□□□ -0.76
VARS-228ENST00000495010 VPS13DQ5THJ4 4388 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 ELOA3CA0A087WX78 387 aaPredicted RBP10.31□□□□□ -0.76
VARS-228ENST00000495010 ZNF705EA8MWA4 302 aaPredicted RBP10.31□□□□□ -0.76
VARS-228ENST00000495010 PMP2P02689 132 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 AMBPP02760 352 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 NPPCP23582 126 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 NPY1RP25929 384 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 RFX2P48378 723 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 ZNF114Q8NC26 417 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 OR5H2Q8NGV7 314 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 NARS2Q96I59 477 aaKnown RBP10.31□□□□□ -0.76
VARS-228ENST00000495010 CLEC5AQ9NY25 188 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 X6R8D5 127 aa10.31□□□□□ -0.76
VARS-228ENST00000495010 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 SCGB2A1O75556 95 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 GIG44P09565 113 aaPredicted RBP10.3□□□□□ -0.76
VARS-228ENST00000495010 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 C4BPBP20851 252 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 SNCAP37840 140 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 HSPA13P48723 471 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 TAS2R46P59540 309 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 PRCDQ00LT1 54 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 ACTL10Q5JWF8 245 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 ZNF767PQ75MW2 155 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 OR6F1Q8NGZ6 308 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 GRAMD2BQ96HH9 432 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 METTL26Q96S19 204 aa10.3□□□□□ -0.76
VARS-228ENST00000495010 K7EQG2 157 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 RTL8CO15255 209 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 IFNA10P01566 189 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 IFNA21P01568 189 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 IFNA17P01571 189 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 CLEC2LP0C7M8 214 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 EIF2B2P49770 351 aaKnown RBP10.29□□□□□ -0.76
VARS-228ENST00000495010 GABARAPL2P60520 117 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 HSPE1P61604 102 aaKnown RBP10.29□□□□□ -0.76
VARS-228ENST00000495010 PHLDA2Q53GA4 152 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 LPCAT3Q6P1A2 487 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 UBE2DNLQ8IWF7 75 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 FCGR1BQ92637 280 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 TMEM230Q96A57 120 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 S100A16Q96FQ6 103 aaKnown RBP10.29□□□□□ -0.76
VARS-228ENST00000495010 ZFAND3Q9H8U3 227 aa10.29□□□□□ -0.76
VARS-228ENST00000495010 TMEM50AO95807 157 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 P2RY1P47900 373 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 SUB1P53999 127 aaKnown RBP eCLIP10.28□□□□□ -0.76
VARS-228ENST00000495010 NUTF2P61970 127 aaKnown RBP10.28□□□□□ -0.76
VARS-228ENST00000495010 C12orf74Q32Q52 190 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 LGALS9BQ3B8N2 356 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 IZUMO2Q6UXV1 221 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 SEC22AQ96IW7 307 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 FXYD6Q9H0Q3 95 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
VARS-228ENST00000495010 CELA1Q9UNI1 258 aa10.28□□□□□ -0.76
VARS-228ENST00000495010 LOC100506127A0A0U1RQW1 187 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 A0A1B0GU03 582 aa10.27□□□□□ -0.77
VARS-228ENST00000495010 ANKRD65E5RJM6 399 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms