RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	GGACT	Q9BVM4	153 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	ZNF355P	Q9NSJ1	428 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	SERTAD4	Q9NUC0	356 aa		10.63	□□□□□ -0.71
APTX-231	ENST00000494973	GAR1	Q9NY12	217 aa	Known RBP	10.63	□□□□□ -0.71
APTX-231	ENST00000494973	TEP1	Q99973	2627 aa	Known RBP	10.63	□□□□□ -0.71
APTX-231	ENST00000494973	IGLV11-55	A0A075B6I3	123 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	LINC01548	A6NM66	108 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	FNDC10	F2Z333	226 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	TMEM50A	O95807	157 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	IGLV1-40	P01703	118 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	REG1A	P05451	166 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	APELA	P0DMC3	54 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	S100A11	P31949	105 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	GPX4	P36969	197 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-231	ENST00000494973	OR2F1	Q13607	317 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973		Q6ZS46	218 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	ACOT7L	Q6ZUV0	252 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	OR5T1	Q8NG75	326 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	NOL4L	Q96MY1	436 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-231	ENST00000494973	OR4C12	Q96R67	309 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	ATP6V0B	Q99437	205 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973	TNFSF18	Q9UNG2	199 aa		10.62	□□□□□ -0.71
APTX-231	ENST00000494973		G3V3Q6	166 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	ARPC5	O15511	151 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	DFFB	O76075	338 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	PF4V1	P10720	104 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	OPRK1	P41145	380 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
APTX-231	ENST00000494973	ATP6V1F	Q16864	119 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	TMEM95	Q3KNT9	176 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	LILRB2	Q8N423	598 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	OR1S2	Q8NGQ3	325 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	LINC01006	Q8NI28	216 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	VN1R17P	Q8TDU5	208 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	WFDC12	Q8WWY7	111 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	MISP3	Q96FF7	219 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	SLC35E1	Q96K37	410 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	MFF	Q9GZY8	342 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	RNF114	Q9Y508	228 aa		10.61	□□□□□ -0.71
APTX-231	ENST00000494973	C2CD3	Q4AC94	2353 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	TRBV9	A0A0B4J1U6	114 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973		A0A0D9SG52	128 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	FAM24A	A6NFZ4	105 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	TAAR5	O14804	337 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	TRGV3	P03979	118 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	METTL15P1	P0C7V9	234 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	PSMB8	P28062	276 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	AP2S1	P53680	142 aa	Predicted RBP	10.6	□□□□□ -0.71
APTX-231	ENST00000494973	TPPP2	P59282	170 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	DLK1	P80370	383 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	RHOG	P84095	191 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	CD69	Q07108	199 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	KLHDC1	Q8N7A1	406 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	RNF152	Q8N8N0	203 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	LINC00527	Q9UJ94	153 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	FBXL7	Q9UJT9	491 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	HSPB11	Q9Y547	144 aa		10.6	□□□□□ -0.71
APTX-231	ENST00000494973	IGSF23	A1L1A6	192 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	SMLR1	H3BR10	107 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	ATP5G2	Q06055	141 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	SLC38A11	Q08AI6	406 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	ZNF266	Q14584	549 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973		Q5BKY6	102 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	OR8G2P	Q6IF36	304 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	SLC16A13	Q7RTY0	426 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	EEF1AKMT3	Q96AZ1	226 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	FANCD2OS	Q96PS1	177 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	TXN2	Q99757	166 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	TMEM147	Q9BVK8	224 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	JMJD1C	Q15652	2540 aa		10.59	□□□□□ -0.71
APTX-231	ENST00000494973	TRBV7-1	A0A0A6YYK4	115 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	SOX15	O60248	233 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	OR2J3	O76001	311 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	CST7	O76096	145 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	MT-CO2	P00403	227 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	FCGR2B	P31994	310 aa	Predicted RBP	10.58	□□□□□ -0.72
APTX-231	ENST00000494973	NPBWR1	P48145	328 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	RAB9A	P51151	201 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	PROK1	P58294	105 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	EIF5A	P63241	154 aa	Known RBP	10.58	□□□□□ -0.72
APTX-231	ENST00000494973	C15orf32	Q32M92	178 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	ZNF329	Q86UD4	541 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.58	□□□□□ -0.72
APTX-231	ENST00000494973	OR5AU1	Q8NGC0	362 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	TMEM170A	Q8WVE7	144 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	TMEM158	Q8WZ71	300 aa		10.58	□□□□□ -0.72
APTX-231	ENST00000494973	TRAV30	A0A087WSZ9	112 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	KANTR	A0A1W2PQU2	76 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	RNF222	A6NCQ9	220 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	PMS2P5	A8MQ11	134 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973		I3L2K1	104 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	MPDU1	O75352	247 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	FABP1	P07148	127 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
APTX-231	ENST00000494973	MFAP2	P55001	183 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	MFAP4	P55083	255 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	KCNRG	Q8N5I3	272 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	TMEM217	Q8N7C4	229 aa		10.57	□□□□□ -0.72
APTX-231	ENST00000494973	OR5C1	Q8NGR4	320 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms