RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 FBXO24O75426 580 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 IGHG2P01859 326 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 APELAP0DMC3 54 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 EGR2P11161 476 aaPredicted RBP8.7□□□□□ -1.02
PKP4-215ENST00000494945 CD99P14209 185 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 CD69Q07108 199 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 AKIRIN2Q53H80 203 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 ASPHD1Q5U4P2 390 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 ETFRF1Q6IPR1 90 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 RBMS3Q6XE24 437 aaKnown RBP8.7□□□□□ -1.02
PKP4-215ENST00000494945 SIGLECL1Q8N7X8 197 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 SCARB1Q8WTV0 552 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 GNPNAT1Q96EK6 184 aaPredicted RBP8.7□□□□□ -1.02
PKP4-215ENST00000494945 WDR61Q9GZS3 305 aaKnown RBP8.7□□□□□ -1.02
PKP4-215ENST00000494945 ZNF580Q9UK33 172 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 CDC42EP3Q9UKI2 254 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 FBXO7Q9Y3I1 522 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 HIVEP2P31629 2446 aa8.7□□□□□ -1.02
PKP4-215ENST00000494945 RPS10-NUDT3A0A1W2PQS6 291 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 IGF1P05019 195 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 SEC11BP0C7V7 166 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 SPP1P10451 314 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 DEFA4P12838 97 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 MDKP21741 143 aaPredicted RBP8.69□□□□□ -1.02
PKP4-215ENST00000494945 ATP6V0CP27449 155 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 MFAP2P55001 183 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 C9orf152Q5JTZ5 239 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 UNQ5815/PRO19632Q6UWF5 114 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 ALKAL2Q6UX46 152 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 SLC16A13Q7RTY0 426 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 SLC35E3Q7Z769 313 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 HSD17B11Q8NBQ5 300 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 LFNGQ8NES3 379 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 FAM110DQ8TAY7 271 aaPredicted RBP8.69□□□□□ -1.02
PKP4-215ENST00000494945 TAF15Q92804 592 aaKnown RBP eCLIP8.69□□□□□ -1.02
PKP4-215ENST00000494945 SMR3AQ99954 134 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
PKP4-215ENST00000494945 WNT10AQ9GZT5 417 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 NPVFQ9HCQ7 196 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 WDR83OSQ9Y284 106 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 TIMM9Q9Y5J7 89 aa8.69□□□□□ -1.02
PKP4-215ENST00000494945 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 SH2D7A6NKC9 451 aaPredicted RBP8.68□□□□□ -1.02
PKP4-215ENST00000494945 HIST1H1BP16401 226 aaKnown RBP8.68□□□□□ -1.02
PKP4-215ENST00000494945 FGF7P21781 194 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 OPRK1P41145 380 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 AKR1C1Q04828 323 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 KLK9Q2XQG4 91 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 ARSJQ5FYB0 599 aaPredicted RBP8.68□□□□□ -1.02
PKP4-215ENST00000494945 TMED6Q8WW62 240 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 MISP3Q96FF7 219 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 SLC35E1Q96K37 410 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 KLK9Q9UKQ9 250 aa8.68□□□□□ -1.02
PKP4-215ENST00000494945 SETXQ7Z333 2677 aaKnown RBP8.67□□□□□ -1.02
PKP4-215ENST00000494945 NSD1Q96L73 2696 aaPredicted RBP8.67□□□□□ -1.02
PKP4-215ENST00000494945 HIVEP1P15822 2718 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 IGLV11-55A0A075B6I3 123 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 TRAV41A0A0B4J266 112 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 LINC01548A6NM66 108 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 C17orf112F2Z3M2 114 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 AP4M1O00189 453 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 SOX15O60248 233 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 SRD5A1P18405 259 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 BLCAPP62952 87 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 RAB31Q13636 194 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 GAMTQ14353 236 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 ECSCRQ19T08 205 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 C19orf54Q5BKX5 351 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 TEPPQ6URK8 271 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 BTNL8Q6UX41 500 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 TMEM144Q7Z5S9 345 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 CENPVQ7Z7K6 275 aaPredicted RBP8.67□□□□□ -1.02
PKP4-215ENST00000494945 OR5T1Q8NG75 326 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 LRRC20Q8TCA0 184 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 PRSS22Q9GZN4 317 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 NPFFR1Q9GZQ6 430 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 SH3BGRL3Q9H299 93 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 SLC25A32Q9H2D1 315 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 FNDC4Q9H6D8 234 aaPredicted RBP8.67□□□□□ -1.02
PKP4-215ENST00000494945 KCNIP2Q9NS61 270 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 THYN1Q9P016 225 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 LSM4Q9Y4Z0 139 aaKnown RBP8.67□□□□□ -1.02
PKP4-215ENST00000494945 DMRT1Q9Y5R6 373 aa8.67□□□□□ -1.02
PKP4-215ENST00000494945 UMAD1C9J7I0 102 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 CLDN34H7C241 214 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 I3L2K1 104 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 BRI3O95415 125 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 MT-CO2P00403 227 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 SULT1A2P50226 295 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 RAB5CP51148 216 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 RAB14P61106 215 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 SERF2P84101 59 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 RUNX1Q01196 453 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 C19orf35Q6ZS72 473 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 ZNF709Q8N972 641 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 OR2G3Q8NGZ4 309 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 RNF141Q8WVD5 230 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 FANCD2OSQ96PS1 177 aa8.66□□□□□ -1.02
PKP4-215ENST00000494945 NPCDR1Q9BY65 106 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms