RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TMEM222Q9H0R3 208 aa24.97■■□□□ 1.59
CBX4-203ENST00000494546 WFDC10AQ9H1F0 79 aa24.97■■□□□ 1.59
CBX4-203ENST00000494546 NAA60Q9H7X0 242 aa24.97■■□□□ 1.59
CBX4-203ENST00000494546 A0A0G2JRQ6 117 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 OR11H12B2RN74 326 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 I3L2K1 104 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 NDUFA4O00483 81 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 MT-CO2P00403 227 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 SOSTQ9BQB4 213 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 GPR132Q9UNW8 380 aa24.96■■□□□ 1.59
CBX4-203ENST00000494546 TENM3Q9P273 2699 aa24.95■■□□□ 1.58
CBX4-203ENST00000494546 IGHV3OR16-8A0A075B7F1 116 aa24.95■■□□□ 1.58
CBX4-203ENST00000494546 IGHV3-48P01763 117 aa24.95■■□□□ 1.58
CBX4-203ENST00000494546 MFAP4P55083 255 aa24.95■■□□□ 1.58
CBX4-203ENST00000494546 RBPMS2Q6ZRY4 209 aaKnown RBP24.95■■□□□ 1.58
CBX4-203ENST00000494546 SLC16A13Q7RTY0 426 aa24.95■■□□□ 1.58
CBX4-203ENST00000494546 DAZ1Q9NQZ3 744 aaKnown RBP24.95■■□□□ 1.58
CBX4-203ENST00000494546 GAR1Q9NY12 217 aaKnown RBP24.95■■□□□ 1.58
CBX4-203ENST00000494546 CTSGP08311 255 aa24.94■■□□□ 1.58
CBX4-203ENST00000494546 SNCAP37840 140 aa24.94■■□□□ 1.58
CBX4-203ENST00000494546 ETV6P41212 452 aa24.94■■□□□ 1.58
CBX4-203ENST00000494546 OR52B4Q8NGK2 314 aa24.94■■□□□ 1.58
CBX4-203ENST00000494546 SPATA25Q9BR10 227 aa24.94■■□□□ 1.58
CBX4-203ENST00000494546 MCUBQ9NWR8 336 aa24.94■■□□□ 1.58
CBX4-203ENST00000494546 STAB2Q8WWQ8 2551 aa24.93■■□□□ 1.58
CBX4-203ENST00000494546 NUPL2O15504 423 aaKnown RBP24.93■■□□□ 1.58
CBX4-203ENST00000494546 CDS2O95674 445 aa24.93■■□□□ 1.58
CBX4-203ENST00000494546 HOXA1P49639 335 aaPredicted RBP24.93■■□□□ 1.58
CBX4-203ENST00000494546 GLYATL2Q8WU03 294 aa24.93■■□□□ 1.58
CBX4-203ENST00000494546 SRD5A3Q9H8P0 318 aa24.93■■□□□ 1.58
CBX4-203ENST00000494546 ZNF207O43670 478 aaKnown RBP24.92■■□□□ 1.58
CBX4-203ENST00000494546 LHFPL5Q8TAF8 219 aa24.92■■□□□ 1.58
CBX4-203ENST00000494546 ENY2Q9NPA8 101 aa24.92■■□□□ 1.58
CBX4-203ENST00000494546 SCP2D1Q9UJQ7 156 aa24.92■■□□□ 1.58
CBX4-203ENST00000494546 TRAV25A0A0B4J276 109 aa24.91■■□□□ 1.58
CBX4-203ENST00000494546 CRYM-AS1A6NIL9 109 aa24.91■■□□□ 1.58
CBX4-203ENST00000494546 DHODHQ02127 395 aa24.91■■□□□ 1.58
CBX4-203ENST00000494546 RELQ04864 619 aaPredicted RBP24.91■■□□□ 1.58
CBX4-203ENST00000494546 RBPMSQ93062 196 aaKnown RBP24.91■■□□□ 1.58
CBX4-203ENST00000494546 TXN2Q99757 166 aa24.91■■□□□ 1.58
CBX4-203ENST00000494546 INS-IGF2F8WCM5 200 aa24.9■■□□□ 1.58
CBX4-203ENST00000494546 ANKRD55Q3KP44 614 aa24.9■■□□□ 1.58
CBX4-203ENST00000494546 LINC00322Q6ZN03 302 aaPredicted RBP24.9■■□□□ 1.58
CBX4-203ENST00000494546 Q6ZRM9 215 aa24.9■■□□□ 1.58
CBX4-203ENST00000494546 FAM219AQ8IW50 185 aa24.9■■□□□ 1.58
CBX4-203ENST00000494546 SELENOHQ8IZQ5 122 aaKnown RBP24.9■■□□□ 1.58
CBX4-203ENST00000494546 RBMY1BA6NDE4 496 aaKnown RBP24.89■■□□□ 1.58
CBX4-203ENST00000494546 RBMY1EA6NEQ0 496 aaKnown RBP24.89■■□□□ 1.58
CBX4-203ENST00000494546 C3orf84H3BNL1 204 aa24.89■■□□□ 1.58
CBX4-203ENST00000494546 RBMY1DP0C7P1 496 aaKnown RBP24.89■■□□□ 1.58
CBX4-203ENST00000494546 FCGR2BP31994 310 aaPredicted RBP24.89■■□□□ 1.58
CBX4-203ENST00000494546 K7EMT4 169 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 GNG7O60262 68 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 YIF1AO95070 293 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 SUB1P53999 127 aaKnown RBP eCLIP24.88■■□□□ 1.57
CBX4-203ENST00000494546 PYDC2Q56P42 97 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 TMEM268Q5VZI3 342 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 MUC7Q8TAX7 377 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 SCGB3A2Q96PL1 93 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 CITED4Q96RK1 184 aa24.88■■□□□ 1.57
CBX4-203ENST00000494546 C15orf62A8K5M9 175 aa24.87■■□□□ 1.57
CBX4-203ENST00000494546 CTNNBIP1Q9NSA3 81 aaPredicted RBP24.87■■□□□ 1.57
CBX4-203ENST00000494546 RNASE2P10153 161 aaKnown RBP24.86■■□□□ 1.57
CBX4-203ENST00000494546 LAMTOR1Q6IAA8 161 aa24.86■■□□□ 1.57
CBX4-203ENST00000494546 DUSP18Q8NEJ0 188 aa24.86■■□□□ 1.57
CBX4-203ENST00000494546 TMEM230Q96A57 120 aa24.86■■□□□ 1.57
CBX4-203ENST00000494546 GPR146Q96CH1 333 aa24.86■■□□□ 1.57
CBX4-203ENST00000494546 ZNF414Q96IQ9 312 aa24.86■■□□□ 1.57
CBX4-203ENST00000494546 S100A5P33763 92 aa24.85■■□□□ 1.57
CBX4-203ENST00000494546 SPCS3P61009 180 aa24.85■■□□□ 1.57
CBX4-203ENST00000494546 SPAG8Q99932 426 aaPredicted RBP24.85■■□□□ 1.57
CBX4-203ENST00000494546 RETNQ9HD89 108 aa24.85■■□□□ 1.57
CBX4-203ENST00000494546 CACNG5Q9UF02 275 aa24.85■■□□□ 1.57
CBX4-203ENST00000494546 KCNIP3Q9Y2W7 256 aa24.85■■□□□ 1.57
CBX4-203ENST00000494546 NPBWR1P48145 328 aa24.84■■□□□ 1.57
CBX4-203ENST00000494546 RBM38Q9H0Z9 239 aaKnown RBP24.84■■□□□ 1.57
CBX4-203ENST00000494546 PRR13Q9NZ81 148 aa24.84■■□□□ 1.57
CBX4-203ENST00000494546 TMEM56-RWDD3S4R434 201 aa24.84■■□□□ 1.57
CBX4-203ENST00000494546 V9GYH0 126 aa24.84■■□□□ 1.57
CBX4-203ENST00000494546 CORTO00230 105 aa24.83■■□□□ 1.57
CBX4-203ENST00000494546 AKR1C4P17516 323 aa24.83■■□□□ 1.57
CBX4-203ENST00000494546 FAUP35544 74 aaKnown RBP24.83■■□□□ 1.57
CBX4-203ENST00000494546 OR52E5Q8NH55 327 aa24.83■■□□□ 1.57
CBX4-203ENST00000494546 HIPK2Q9H2X6 1198 aa24.83■■□□□ 1.57
CBX4-203ENST00000494546 SMPXQ9UHP9 88 aa24.83■■□□□ 1.57
CBX4-203ENST00000494546 TSPAN4O14817 238 aa24.82■■□□□ 1.56
CBX4-203ENST00000494546 KLF9Q13886 244 aaPredicted RBP24.82■■□□□ 1.56
CBX4-203ENST00000494546 TMEM187Q14656 261 aa24.82■■□□□ 1.56
CBX4-203ENST00000494546 AARDQ4LEZ3 155 aa24.82■■□□□ 1.56
CBX4-203ENST00000494546 PVRIGQ6DKI7 326 aa24.82■■□□□ 1.56
CBX4-203ENST00000494546 TRIM63Q969Q1 353 aa24.82■■□□□ 1.56
CBX4-203ENST00000494546 IGHV3-49A0A0A0MS15 119 aa24.81■■□□□ 1.56
CBX4-203ENST00000494546 AP3S2P59780 193 aa24.81■■□□□ 1.56
CBX4-203ENST00000494546 TOMM5Q8N4H5 51 aa24.81■■□□□ 1.56
CBX4-203ENST00000494546 TMEM116Q8NCL8 245 aa24.81■■□□□ 1.56
CBX4-203ENST00000494546 GALNT14Q96FL9 552 aa24.81■■□□□ 1.56
CBX4-203ENST00000494546 OR10C1Q96KK4 312 aa24.81■■□□□ 1.56
CBX4-203ENST00000494546 IGHV7-4-1A0A0J9YVY3 117 aa24.8■■□□□ 1.56
CBX4-203ENST00000494546 OPRK1P41145 380 aa24.8■■□□□ 1.56
CBX4-203ENST00000494546 IL22RA2Q969J5 263 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms