RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 HLA-DRB1P01911 266 aa16.33■□□□□ 0.2
KPNA1-210ENST00000494339 PRH1P02810 166 aa16.33■□□□□ 0.2
KPNA1-210ENST00000494339 RUNX1Q01196 453 aa16.33■□□□□ 0.2
KPNA1-210ENST00000494339 TMEM182Q6ZP80 229 aaPredicted RBP16.33■□□□□ 0.2
KPNA1-210ENST00000494339 MRPL41Q8IXM3 137 aaKnown RBP16.33■□□□□ 0.2
KPNA1-210ENST00000494339 SMR3AQ99954 134 aa16.33■□□□□ 0.2
KPNA1-210ENST00000494339 MAST4O15021 2626 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 RAB19A4D1S5 217 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 CAMLGP49069 296 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 C2orf83Q53S99 150 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 Q6ZRG5 221 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 C19orf35Q6ZS72 473 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 TAF15Q92804 592 aaKnown RBP eCLIP16.32■□□□□ 0.2
KPNA1-210ENST00000494339 P2RX4Q99571 388 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 TNFRSF19Q9NS68 423 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 PITPNC1Q9UKF7 332 aa16.32■□□□□ 0.2
KPNA1-210ENST00000494339 UBE2L5PA0A1B0GUS4 154 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 SRP14P37108 136 aaKnown RBP16.31■□□□□ 0.2
KPNA1-210ENST00000494339 IER3P46695 156 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 SERF2P84101 59 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 IL34Q6ZMJ4 242 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 TEX29Q8N6K0 151 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 FBXO7Q9Y3I1 522 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 TIMM9Q9Y5J7 89 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 HIVEP1P15822 2718 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 PRSS46E5RG02 174 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 AMY1AP04745 511 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 AKR1C8PQ5T2L2 129 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 DPPA3Q6W0C5 159 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 LYPD6BQ8NI32 183 aa16.31■□□□□ 0.2
KPNA1-210ENST00000494339 I3L521 148 aa16.3■□□□□ 0.2
KPNA1-210ENST00000494339 DLK1P80370 383 aa16.3■□□□□ 0.2
KPNA1-210ENST00000494339 BTNL8Q6UX41 500 aa16.3■□□□□ 0.2
KPNA1-210ENST00000494339 Q6YL49 198 aa16.3■□□□□ 0.2
KPNA1-210ENST00000494339 HRH4Q9H3N8 390 aa16.3■□□□□ 0.2
KPNA1-210ENST00000494339 TEX46H3BTG2 121 aa16.29■□□□□ 0.2
KPNA1-210ENST00000494339 SUB1P53999 127 aaKnown RBP eCLIP16.29■□□□□ 0.2
KPNA1-210ENST00000494339 UQCC3Q6UW78 93 aa16.29■□□□□ 0.2
KPNA1-210ENST00000494339 CENPVQ7Z7K6 275 aaPredicted RBP16.29■□□□□ 0.2
KPNA1-210ENST00000494339 SRSF8Q9BRL6 282 aaKnown RBP16.29■□□□□ 0.2
KPNA1-210ENST00000494339 RSG1Q9BU20 258 aa16.29■□□□□ 0.2
KPNA1-210ENST00000494339 SMCO3A2RU48 225 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 BTBD17A6NE02 478 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 LINC01548A6NM66 108 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 MDKP21741 143 aaPredicted RBP16.28■□□□□ 0.2
KPNA1-210ENST00000494339 ZNF616Q08AN1 781 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 LFNGQ8NES3 379 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 FAM213BQ8TBF2 198 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 RFNGQ9Y644 331 aa16.28■□□□□ 0.2
KPNA1-210ENST00000494339 MPDU1O75352 247 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 EGR2P11161 476 aaPredicted RBP16.27■□□□□ 0.2
KPNA1-210ENST00000494339 FGF7P21781 194 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 MFAP2P55001 183 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 C9orf152Q5JTZ5 239 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 TOR2AQ5JU69 321 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 ASPHD1Q5U4P2 390 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 COMMD1Q8N668 190 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 ZNF114Q8NC26 417 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 OR5R1Q8NH85 324 aa16.27■□□□□ 0.2
KPNA1-210ENST00000494339 FNDC10F2Z333 226 aa16.27■□□□□ 0.19
KPNA1-210ENST00000494339 ATP6V0E1O15342 81 aa16.27■□□□□ 0.19
KPNA1-210ENST00000494339 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.19
KPNA1-210ENST00000494339 FHITP49789 147 aa16.27■□□□□ 0.19
KPNA1-210ENST00000494339 MLANAQ16655 118 aa16.27■□□□□ 0.19
KPNA1-210ENST00000494339 ZNF709Q8N972 641 aa16.27■□□□□ 0.19
KPNA1-210ENST00000494339 WDR83OSQ9Y284 106 aa16.27■□□□□ 0.19
KPNA1-210ENST00000494339 F11RQ9Y624 299 aaKnown RBP16.27■□□□□ 0.19
KPNA1-210ENST00000494339 MXRA5Q9NR99 2828 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 M0QZK8 103 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 TSPAN15O95858 294 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 CTRB1P17538 263 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 ARSJQ5FYB0 599 aaPredicted RBP16.26■□□□□ 0.19
KPNA1-210ENST00000494339 CTRB2Q6GPI1 263 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 SIGLECL1Q8N7X8 197 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 OR1P1Q8NH06 330 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 MISP3Q96FF7 219 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 WNT10AQ9GZT5 417 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 PRDM13Q9H4Q3 707 aa16.26■□□□□ 0.19
KPNA1-210ENST00000494339 KRBOX1C9JBD0 128 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 C17orf112F2Z3M2 114 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 SOX15O60248 233 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 LY6G6DO95868 133 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 DEFA4P12838 97 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 HNF1AP20823 631 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 OPRK1P41145 380 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 BLCAPP62952 87 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 C16orf82Q7Z2V1 217 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 SGMS2Q8NHU3 365 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 NPCDR1Q9BY65 106 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 DMRT1Q9Y5R6 373 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 ECSCRQ19T08 205 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 NPVFQ9HCQ7 196 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 VPREB3Q9UKI3 123 aa16.25■□□□□ 0.19
KPNA1-210ENST00000494339 CD69Q07108 199 aa16.24■□□□□ 0.19
KPNA1-210ENST00000494339 RNASEH2CQ8TDP1 164 aaKnown RBP16.24■□□□□ 0.19
KPNA1-210ENST00000494339 TMUB1Q9BVT8 246 aa16.24■□□□□ 0.19
KPNA1-210ENST00000494339 FNDC4Q9H6D8 234 aaPredicted RBP16.24■□□□□ 0.19
KPNA1-210ENST00000494339 IGHV3-48P01763 117 aa16.23■□□□□ 0.19
KPNA1-210ENST00000494339 MBP02144 154 aa16.23■□□□□ 0.19
KPNA1-210ENST00000494339 H2AFB1P0C5Y9 115 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms