RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 BSCL2Q96G97 398 aaPredicted RBP16.58■□□□□ 0.24
HPS3-207ENST00000494327 ENY2Q9NPA8 101 aa16.58■□□□□ 0.24
HPS3-207ENST00000494327 PRR13Q9NZ81 148 aa16.58■□□□□ 0.24
HPS3-207ENST00000494327 TMEM213A2RRL7 107 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 IGHV3-48P01763 117 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 GUCA2BQ16661 112 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 FAM219AQ8IW50 185 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 UXS1Q8NBZ7 420 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 ZNF114Q8NC26 417 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 CHRDL1Q9BU40 450 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 PALMDQ9NP74 551 aa16.57■□□□□ 0.24
HPS3-207ENST00000494327 TECRQ9NZ01 308 aaKnown RBP16.57■□□□□ 0.24
HPS3-207ENST00000494327 I3L2K1 104 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 MT-CO2P00403 227 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 IGHV4-30-4P0DP06 118 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 ZNF57Q68EA5 555 aaPredicted RBP16.56■□□□□ 0.24
HPS3-207ENST00000494327 SBSPONQ8IVN8 264 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 GPR146Q96CH1 333 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 SDHCQ99643 169 aaPredicted RBP16.56■□□□□ 0.24
HPS3-207ENST00000494327 CCDC32Q9BV29 185 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.56■□□□□ 0.24
HPS3-207ENST00000494327 UFC1Q9Y3C8 167 aa16.56■□□□□ 0.24
HPS3-207ENST00000494327 A8MWP6 167 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 F8W735 103 aaPredicted RBP16.55■□□□□ 0.24
HPS3-207ENST00000494327 MFAP4P55083 255 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 TMEM187Q14656 261 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 BAK1Q16611 211 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 TRIQKQ629K1 86 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 SPSB3Q6PJ21 355 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 TMED4Q7Z7H5 227 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 ZNF436Q9C0F3 470 aaPredicted RBP16.55■□□□□ 0.24
HPS3-207ENST00000494327 CACNG5Q9UF02 275 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 MLXQ9UH92 298 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 TMEM56-RWDD3S4R434 201 aa16.55■□□□□ 0.24
HPS3-207ENST00000494327 IGHV3OR16-8A0A075B7F1 116 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 ZNF785A8K8V0 405 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 ADMP35318 185 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 INPP1P49441 399 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 SUB1P53999 127 aaKnown RBP eCLIP16.54■□□□□ 0.24
HPS3-207ENST00000494327 WDR89Q96FK6 387 aaPredicted RBP16.54■□□□□ 0.24
HPS3-207ENST00000494327 GALNT14Q96FL9 552 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 ATP6V0BQ99437 205 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 C20orf24Q9BUV8 137 aa16.54■□□□□ 0.24
HPS3-207ENST00000494327 NUPL2O15504 423 aaKnown RBP16.53■□□□□ 0.24
HPS3-207ENST00000494327 NXPH3O95157 252 aa16.53■□□□□ 0.24
HPS3-207ENST00000494327 CD81P60033 236 aa16.53■□□□□ 0.24
HPS3-207ENST00000494327 SPCS3P61009 180 aa16.53■□□□□ 0.24
HPS3-207ENST00000494327 BTNL8Q6UX41 500 aa16.53■□□□□ 0.24
HPS3-207ENST00000494327 GAR1Q9NY12 217 aaKnown RBP16.53■□□□□ 0.24
HPS3-207ENST00000494327 U3KQK5 164 aa16.53■□□□□ 0.24
HPS3-207ENST00000494327 INS-IGF2F8WCM5 200 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 NDUFA4O00483 81 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 CTSGP08311 255 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 ANXA3P12429 323 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 IL7P13232 177 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 SUPT4H1P63272 117 aaKnown RBP16.52■□□□□ 0.24
HPS3-207ENST00000494327 TMEM190Q8WZ59 177 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 IL22RA2Q969J5 263 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 MARC2Q969Z3 335 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 TUBA4BQ9H853 241 aa16.52■□□□□ 0.24
HPS3-207ENST00000494327 MRPL27Q9P0M9 148 aaKnown RBP16.52■□□□□ 0.24
HPS3-207ENST00000494327 ZNF207O43670 478 aaKnown RBP16.51■□□□□ 0.23
HPS3-207ENST00000494327 GNG7O60262 68 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 RNASE2P10153 161 aaKnown RBP16.51■□□□□ 0.23
HPS3-207ENST00000494327 ELLP55199 621 aaPredicted RBP16.51■□□□□ 0.23
HPS3-207ENST00000494327 LYZL2Q7Z4W2 148 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 TMEM61Q8N0U2 210 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 OR52E5Q8NH55 327 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 TXN2Q99757 166 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 NEURL2Q9BR09 285 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 C19orf73Q9NVV2 129 aa16.51■□□□□ 0.23
HPS3-207ENST00000494327 CEBPZOSA8MTT3 80 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 UPK1BO75841 260 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 YIF1AO95070 293 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 SCAF4O95104 1147 aaKnown RBP16.5■□□□□ 0.23
HPS3-207ENST00000494327 CD7P09564 240 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 C8orf88P0DMB2 117 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 RELQ04864 619 aaPredicted RBP16.5■□□□□ 0.23
HPS3-207ENST00000494327 LGI3Q8N145 548 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 DUSP18Q8NEJ0 188 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 DEDD2Q8WXF8 326 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 SLC25A21Q9BQT8 299 aaPredicted RBP16.5■□□□□ 0.23
HPS3-207ENST00000494327 HEYLQ9NQ87 328 aaPredicted RBP16.5■□□□□ 0.23
HPS3-207ENST00000494327 DAZ1Q9NQZ3 744 aaKnown RBP16.5■□□□□ 0.23
HPS3-207ENST00000494327 DNAH9Q9NYC9 4486 aa16.5■□□□□ 0.23
HPS3-207ENST00000494327 LINC00854A0A1B0GVQ3 168 aa16.49■□□□□ 0.23
HPS3-207ENST00000494327 SULT1A3P0DMM9 295 aa16.49■□□□□ 0.23
HPS3-207ENST00000494327 SULT1A4P0DMN0 295 aa16.49■□□□□ 0.23
HPS3-207ENST00000494327 VAMP1P23763 118 aa16.49■□□□□ 0.23
HPS3-207ENST00000494327 FCGR2BP31994 310 aaPredicted RBP16.49■□□□□ 0.23
HPS3-207ENST00000494327 AARDQ4LEZ3 155 aa16.49■□□□□ 0.23
HPS3-207ENST00000494327 RBPMS2Q6ZRY4 209 aaKnown RBP16.49■□□□□ 0.23
HPS3-207ENST00000494327 COL7A1Q02388 2944 aa16.49■□□□□ 0.23
HPS3-207ENST00000494327 A0A0B4J2A0 478 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 A8MZ25 164 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 CORTO00230 105 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 OPRK1P41145 380 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 NPBWR1P48145 328 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 SRPXP78539 464 aa16.48■□□□□ 0.23
HPS3-207ENST00000494327 MLANAQ16655 118 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms