RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 C11orf53Q8IXP5 236 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 THAP8Q8NA92 274 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR1L1Q8NH94 360 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 RNASE11Q8TAA1 199 aaKnown RBP2□□□□□ -2.09
CDC42EP3-205ENST00000494083 TSKUQ8WUA8 353 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 SKA2Q8WVK7 121 aaPredicted RBP2□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLAMF6Q96DU3 332 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 GPER1Q99527 375 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 CMKLR1Q99788 373 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 ST20Q9HBF5 79 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 NECAP2Q9NVZ3 263 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR1A1Q9P1Q5 309 aa2□□□□□ -2.09
CDC42EP3-205ENST00000494083 ALPK2Q86TB3 2170 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 KALRNO60229 2985 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CTXND1A0A1B0GTU2 59 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMEM89A2RUT3 159 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MAP1LC3B2A6NCE7 125 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NKX2-6A6NCS4 301 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MPZL1O95297 269 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CSN3P07498 182 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR5G3P0C626 314 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF14P17017 642 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 VDAC1P21796 283 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 DYNLT3P51808 116 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 FGF12P61328 243 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMEM267Q0VDI3 215 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 KISS1Q15726 138 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TAF9Q16594 264 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ATP6V1FQ16864 119 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 COX19Q49B96 90 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 OCIAD2Q56VL3 154 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 C19orf35Q6ZS72 473 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 DPY19L4Q7Z388 723 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ERASQ7Z444 233 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 DEFB128Q7Z7B8 93 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 WDR86Q86TI4 376 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NECAP1Q8NC96 275 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NEK7Q8TDX7 302 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 RNF183Q96D59 192 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NDFIP1Q9BT67 221 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 RBM24Q9BX46 236 aaKnown RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MAP1LC3BQ9GZQ8 125 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 KCNIP1Q9NZI2 227 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CKLFQ9UBR5 152 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NOTCH3Q9UM47 2321 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TRAV24A0A0B4J272 114 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMEM150CB9EJG8 249 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 H0YGG7 62 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CD5LO43866 347 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CA2P00918 260 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CD2P06729 351 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 FRMD6-AS1P0C7T7 363 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 FABP4P15090 132 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TUBG1P23258 451 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 GABRA3P34903 492 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CFHR2P36980 270 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 PPOXP50336 477 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 RAB7AP51149 207 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 DAP3P51398 398 aaKnown RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 UBE2G2P60604 165 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 HIST1H4AP62805 103 aaKnown RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TAF13Q15543 124 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC9A3R2Q15599 337 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TCEAL5Q5H9L2 206 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 COL5A1-AS1Q5SY13 56 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MARCH3Q86UD3 253 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 KIR3DL3Q8N743 410 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR5H2Q8NGV7 314 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR4F5Q8NH21 305 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNRF2Q8NHG8 242 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TAF15Q92804 592 aaKnown RBP eCLIP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC25A44Q96H78 314 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 SFRP2Q96HF1 295 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 SGK494Q96LW2 274 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ST6GALNAC5Q9BVH7 336 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NPCDR1Q9BY65 106 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 DNAJC4Q9NNZ3 241 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ESM1Q9NQ30 184 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 RPS10P5Q9NQ39 176 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TUBG2Q9NRH3 451 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TMEM14BQ9NUH8 114 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGKV1D-37A0A075B6S9 117 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 PIGBOS1A0A0B4J2F0 54 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 LRP5LA4QPB2 252 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CD300LBA8K4G0 201 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 CYB5BO43169 146 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ERI3O43414 337 aaKnown RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TIMM8AO60220 97 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 NDUFS7O75251 213 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MAS1P04201 325 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF93P35789 620 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TLE4Q04727 773 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 ATXN7L3Q14CW9 347 aaPredicted RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MPV17L2Q567V2 206 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 MRPL54Q6P161 138 aaKnown RBP1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 TCF23Q7RTU1 214 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 LMX1AQ8TE12 382 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 PIGCQ92535 297 aa1.99□□□□□ -2.09
CDC42EP3-205ENST00000494083 RND1Q92730 232 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms