RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MRPL41Q8IXM3 137 aaKnown RBP8.52□□□□□ -1.05
CLCN6-208ENST00000494028 TBX15Q96SF7 602 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 RNF5Q99942 180 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 PLXNB1O43157 2135 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 TENM4Q6N022 2769 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 A0A1W2PRD5 423 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 A0A1W2PRF3 423 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 A0A1W2PRM7 423 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 TMEM250H0YL14 139 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 NBR2O15453 112 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 PAGE4O60829 102 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 OR5G3P0C626 314 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 PLA2G2AP14555 144 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
CLCN6-208ENST00000494028 PDLIM4P50479 330 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 GNB1P62873 340 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 RAB31Q13636 194 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 MMDQ15546 238 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 MINOS1Q5TGZ0 78 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 SPNS3Q6ZMD2 512 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 CYP2G1PQ6ZSU1 146 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 PPP1R27Q86WC6 154 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 DYNAPQ8N1N2 210 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 C15orf54Q8N8G6 183 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 THAP8Q8NA92 274 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 SRSF12Q8WXF0 261 aaKnown RBP8.51□□□□□ -1.05
CLCN6-208ENST00000494028 CACNG8Q8WXS5 425 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 ACY3Q96HD9 319 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 YPEL4Q96NS1 127 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 CCL19Q99731 98 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 NIPSNAP3BQ9BS92 247 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 MRPL36Q9P0J6 103 aaKnown RBP8.51□□□□□ -1.05
CLCN6-208ENST00000494028 HILPDAQ9Y5L2 63 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 KLF2Q9Y5W3 355 aaPredicted RBP8.51□□□□□ -1.05
CLCN6-208ENST00000494028 MINOS1-NBL1R4GNA1 71 aa8.51□□□□□ -1.05
CLCN6-208ENST00000494028 IGKV1D-37A0A075B6S9 117 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 A0A1W2PPV4 95 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 PSMB11A5LHX3 300 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 COLCA2A8K830 154 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 OOSP1A8MZH6 123 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 CRYGCP07315 174 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 ATP5G3P48201 142 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 RHOBP62745 196 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 MLANAQ16655 118 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 Q8N6K4 173 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 OR2T6Q8NHC8 308 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 ABHD5Q8WTS1 349 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 C17orf50Q8WW18 174 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 HIST1H2BAQ96A08 127 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 HELZ2Q9BYK8 2649 aaKnown RBP8.5□□□□□ -1.05
CLCN6-208ENST00000494028 PARLQ9H300 379 aa8.5□□□□□ -1.05
CLCN6-208ENST00000494028 A0A087WWC5 75 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 ACTL6BO94805 426 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 CXorf1O96002 111 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 MOSP00540 346 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 GCHFRP30047 84 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 RND2P52198 227 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 SUB1P53999 127 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 PNRC1Q12796 327 aaPredicted RBP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 CCDC144NLQ6NUI1 221 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 MIR17HGQ75NE6 70 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 NPBQ8NG41 125 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 OR4F5Q8NH21 305 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 ISOC2Q96AB3 205 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 OR4F4Q96R69 305 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 SPOCK3Q9BQ16 436 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 SRSF8Q9BRL6 282 aaKnown RBP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 TUBA4BQ9H853 241 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 SEPSECSQ9HD40 501 aaKnown RBP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 FUT9Q9Y231 359 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 TBL2Q9Y4P3 447 aaKnown RBP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 DMRT1Q9Y5R6 373 aa8.49□□□□□ -1.05
CLCN6-208ENST00000494028 F11RQ9Y624 299 aaKnown RBP8.49□□□□□ -1.05
CLCN6-208ENST00000494028 TCRBV4S1A1TA0A5B7 111 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 ZNF727A8MUV8 499 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 VWC2LB2RUY7 222 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 C11orf94C9JXX5 98 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 FOXH1O75593 365 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 APELAP0DMC3 54 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 NPPCP23582 126 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
CLCN6-208ENST00000494028 LGALS4P56470 323 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 UBE2G2P60604 165 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 NDPQ00604 133 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 PLGLAQ15195 96 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 RUSC1-AS1Q66K80 236 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 OR1P1Q8NH06 330 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 C10orf105Q8TEF2 133 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 RPUSD4Q96CM3 377 aaKnown RBP8.48□□□□□ -1.05
CLCN6-208ENST00000494028 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 SMIM7Q9BQ49 75 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 MRPL32Q9BYC8 188 aaKnown RBP8.48□□□□□ -1.05
CLCN6-208ENST00000494028 SDF2L1Q9HCN8 221 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 NAT8Q9UHE5 227 aa8.48□□□□□ -1.05
CLCN6-208ENST00000494028 POLR3KQ9Y2Y1 108 aaPredicted RBP8.48□□□□□ -1.05
CLCN6-208ENST00000494028 YTHDF2Q9Y5A9 579 aaKnown RBP8.48□□□□□ -1.05
CLCN6-208ENST00000494028 IGHV4-61A0A0C4DH41 118 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms