RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 SMIM18P0DKX4 95 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 DEFB135Q30KP9 77 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 SPINK9Q5DT21 86 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 WFDC3Q8IUB2 231 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 ZNF414Q96IQ9 312 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 RNF2Q99496 336 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 RHPN1-AS1Q9BWJ2 59 aa17.57■□□□□ 0.4
RHBDD3-206ENST00000493894 KIR2DL5BA0A0G2JN68 375 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 KIR2DL5BA0A0G2JPC4 375 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 CHEK1O14757 476 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 SPRY2O43597 315 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 IGHV3-48P01763 117 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 BMI1P35226 326 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 SNCAP37840 140 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 TRIM16LQ309B1 348 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 GPR107Q5VW38 600 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 KIR2DL5AQ8N109 375 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 STPG3Q8N7X2 389 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 CCDC71LQ8N9Z2 235 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 KIR2DL5BQ8NHK3 375 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 PDCD10Q9BUL8 212 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 COPZ2Q9P299 210 aa17.56■□□□□ 0.4
RHBDD3-206ENST00000493894 ALMS1Q8TCU4 4167 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 IGHV3-49A0A0A0MS15 119 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 TRAV14DV4A0A0A6YYC5 116 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 C3orf85A0A1B0GTC6 90 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 TAS2R19P59542 299 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 ZFAND1Q8TCF1 268 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 GALNT14Q96FL9 552 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 ABHD1Q96SE0 405 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 GINS3Q9BRX5 216 aa17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 C6orf62Q9GZU0 229 aaPredicted RBP17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 EPPK1P58107 5090 aaKnown RBP17.55■□□□□ 0.4
RHBDD3-206ENST00000493894 A0A0J9YWU9 116 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 IFNA17P01571 189 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 P0C879 139 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 RPL35AP18077 110 aaKnown RBP17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 NPBWR1P48145 328 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 SCGB2B2Q4G0G5 96 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 DUSP18Q8NEJ0 188 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 OR4D10Q8NGI6 311 aa17.54■□□□□ 0.4
RHBDD3-206ENST00000493894 INS-IGF2F8WCM5 200 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 ST8SIA3O43173 380 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 CD74P04233 296 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 HOXA1P49639 335 aaPredicted RBP17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 TNFRSF9Q07011 255 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 LYG2Q86SG7 212 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 TMEM229BQ8NBD8 167 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 TERB2Q8NHR7 220 aa17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 RNASE11Q8TAA1 199 aaKnown RBP17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 PLECQ15149 4684 aaKnown RBP17.53■□□□□ 0.4
RHBDD3-206ENST00000493894 A0A0B4J293 547 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 CXorf65A6NEN9 183 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 CORTO00230 105 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 RGS5O15539 181 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 B3GALNT1O75752 331 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 RAB3DO95716 219 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 TFPI2P48307 235 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 CMC4P56277 68 aaPredicted RBP17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 OR13C8Q8NGS7 320 aa17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 RRNAD1Q96FB5 475 aaKnown RBP17.52■□□□□ 0.4
RHBDD3-206ENST00000493894 IGKV3-7A0A075B6H7 116 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 IGHV3OR16-13A0A075B7E8 117 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 IGHV3-74A0A0B4J1X5 117 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 GABARAPH6UMI1 98 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 UCP1P25874 307 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 SUB1P53999 127 aaKnown RBP eCLIP17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 PMS2P11Q13670 270 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 SP6Q3SY56 376 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 STEAP1BQ6NZ63 245 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 TOMM20LQ6UXN7 152 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 APRG1Q8IVJ8 170 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 RNF183Q96D59 192 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 MAP6D1Q9H9H5 199 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 ENY2Q9NPA8 101 aa17.51■□□□□ 0.39
RHBDD3-206ENST00000493894 CD5P06127 495 aa17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 MRPS10P82664 201 aaKnown RBP17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 SSBP1Q04837 148 aaKnown RBP17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 ZNF600Q6ZNG1 722 aa17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 MARCH1Q8TCQ1 289 aa17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 MRPS26Q9BYN8 205 aaKnown RBP17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 MIXL1Q9H2W2 232 aa17.5■□□□□ 0.39
RHBDD3-206ENST00000493894 RNASE2P10153 161 aaKnown RBP17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 ETV6P41212 452 aa17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 PAFAH1B2P68402 229 aa17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 MEF2DQ14814 521 aa17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 FAM90A2PQ658T7 463 aa17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 TCF24Q7RTU0 167 aa17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 GPR141Q7Z602 305 aa17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 C14orf166Q9Y224 244 aaKnown RBP17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 PUS1Q9Y606 427 aaKnown RBP eCLIP17.49■□□□□ 0.39
RHBDD3-206ENST00000493894 A0A0G2JRQ6 117 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 NUPR2A6NF83 97 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 SCGB2A1O75556 95 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 ZNF124Q15973 351 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 PVRIGQ6DKI7 326 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 GBGT1Q8N5D6 347 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 TMEM217Q8N7C4 229 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 ST8SIA2Q92186 375 aa17.48■□□□□ 0.39
RHBDD3-206ENST00000493894 ZFAND3Q9H8U3 227 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms