RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TMEM170AQ8WVE7 144 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 HIPK2Q9H2X6 1198 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 CACFD1Q9UGQ2 172 aa13.8□□□□□ -0.2
PDLIM7-208ENST00000493815 NKX2-1P43699 371 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 RUNX1Q01196 453 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 BSXQ3C1V8 233 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 CCDC140Q96MF4 163 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 THYN1Q9P016 225 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 C7orf66A4D0T2 115 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 K7EIM0 57 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 WRBO00258 174 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 CYB5BO43169 146 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 SYNGR2O43760 224 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 HTR2BP41595 481 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 ID3Q02535 119 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 PRR31Q5SQ13 230 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 CLEC19AQ6UXS0 136 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 GSG1LQ6UXU4 331 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 SLC24A4Q8NFF2 622 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 SCARB1Q8WTV0 552 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 ZC4H2Q9NQZ6 224 aa13.79□□□□□ -0.2
PDLIM7-208ENST00000493815 CMYA5Q8N3K9 4069 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 IFNA10P01566 189 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 MLANAQ16655 118 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 DPF1Q92782 380 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 EEF1AKMT3Q96AZ1 226 aa13.78□□□□□ -0.2
PDLIM7-208ENST00000493815 I3L2K1 104 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 SSSCA1O60232 199 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 MED6O75586 246 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 MT-CO2P00403 227 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 MBPP02686 304 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 HSPB1P04792 205 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 MYCNOSP40205 109 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 SLURP1P55000 103 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 WDR89Q96FK6 387 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 C2orf50Q96LR7 162 aa13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 PEF1Q9UBV8 284 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-208ENST00000493815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 H3BP45 60 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 NPY1RP25929 384 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 FHL3Q13643 280 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 TREML4Q6UXN2 200 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 ZNF502Q8TBZ5 544 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 CXorf58Q96LI9 332 aa13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 PAIP2BQ9ULR5 123 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-208ENST00000493815 LINC01619G3V211 115 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 TMEM50AO95807 157 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 CLEC3BP05452 202 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 H2BFSP57053 126 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 C2orf83Q53S99 150 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 PVRIGQ6DKI7 326 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 LINC00482Q8N8I6 264 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 VN1R17PQ8TDU5 208 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 FNDC4Q9H6D8 234 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 RANGRFQ9HD47 186 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 RCL1Q9Y2P8 373 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 U3KQ87 197 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 TRBV7-1A0A0A6YYK4 115 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 BMPR1BO00238 502 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 HOXD3P31249 432 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 GPR183P32249 361 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 OPRK1P41145 380 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 OR4C12Q96R67 309 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 C21orf62Q9NYP8 219 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 MGAT4CQ9UBM8 478 aa13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 LSM5Q9Y4Y9 91 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-208ENST00000493815 OR2T8A6NH00 312 aa13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 C15orf62A8K5M9 175 aa13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 F8W735 103 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 S100A10P60903 97 aa13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 SPANXN5Q5MJ07 72 aa13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
PDLIM7-208ENST00000493815 IGHV3-35A0A0C4DH35 117 aa13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 OR8U8P0C7N1 319 aa13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 ARL3P36405 182 aa13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 IL15RAQ13261 267 aa13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 Q56UQ5 140 aa13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 DCUN1D4Q92564 292 aa13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
PDLIM7-208ENST00000493815 K7EPK0 472 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 CORTO00230 105 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 OR2C1O95371 312 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 IFNA4P05014 189 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 CXCL3P19876 107 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 CD33P20138 364 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 PAX9P55771 341 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 RAB32Q13637 225 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 PSENENQ9NZ42 101 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 MGAM2Q2M2H8 2515 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 FCN2Q15485 313 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 RPEL1Q2QD12 228 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 LRRC37A5PQ49AS3 106 aa13.72□□□□□ -0.21
PDLIM7-208ENST00000493815 ACSM6Q6P461 480 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms