RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 BLCAPP62952 87 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 VAMP2P63027 116 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 NDPQ00604 133 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 OR52E5Q8NH55 327 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 CITED2Q99967 270 aaPredicted RBP9.51□□□□□ -0.89
UPF3A-210ENST00000493727 RBKSQ9H477 322 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 AURKAIP1Q9NWT8 199 aaPredicted RBP9.51□□□□□ -0.89
UPF3A-210ENST00000493727 HSPB7Q9UBY9 170 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 RCL1Q9Y2P8 373 aaKnown RBP9.51□□□□□ -0.89
UPF3A-210ENST00000493727 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
UPF3A-210ENST00000493727 C9orf118A6NHY6 69 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 PFDN1O60925 122 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 MBPP02686 304 aaPredicted RBP9.5□□□□□ -0.89
UPF3A-210ENST00000493727 RLN2P04090 185 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 AMY1AP04745 511 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 APELAP0DMC3 54 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 IAPPP10997 89 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 PVALBP20472 110 aaPredicted RBP9.5□□□□□ -0.89
UPF3A-210ENST00000493727 PRCDQ00LT1 54 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 FGL1Q08830 312 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 RAB32Q13637 225 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 ECSCRQ19T08 205 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 OR5AU1Q8NGC0 362 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 OR2T35Q8NGX2 323 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 DTD1Q8TEA8 209 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 CHAC2Q8WUX2 184 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 PPP1R1CQ8WVI7 109 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 FAM103A1Q9BTL3 118 aaKnown RBP9.5□□□□□ -0.89
UPF3A-210ENST00000493727 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 RANGRFQ9HD47 186 aaPredicted RBP9.5□□□□□ -0.89
UPF3A-210ENST00000493727 NDUFA4L2Q9NRX3 87 aa9.5□□□□□ -0.89
UPF3A-210ENST00000493727 MSGN1A6NI15 193 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 K7EPK0 472 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 SYNGR2O43760 224 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 PF4V1P10720 104 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 PSMB6P28072 239 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 ERHP84090 104 aaKnown RBP9.49□□□□□ -0.89
UPF3A-210ENST00000493727 AARDQ4LEZ3 155 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 CIB3Q96Q77 187 aaPredicted RBP9.49□□□□□ -0.89
UPF3A-210ENST00000493727 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
UPF3A-210ENST00000493727 PAIP2BQ9ULR5 123 aaKnown RBP9.49□□□□□ -0.89
UPF3A-210ENST00000493727 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
UPF3A-210ENST00000493727 TEX22C9J3V5 150 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 AP4M1O00189 453 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 MPC2O95563 127 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 IGHG2P01859 326 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 REG1AP05451 166 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 OR13C7P0DN81 318 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 SSBP2P81877 361 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-210ENST00000493727 TMEM267Q0VDI3 215 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-210ENST00000493727 UNQ5815/PRO19632Q6UWF5 114 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 HSD17B13Q7Z5P4 300 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-210ENST00000493727 CENPVQ7Z7K6 275 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-210ENST00000493727 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 OR10W1Q8NGF6 305 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 OR4X2Q8NGF9 303 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 THAP6Q8TBB0 222 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 RAB40CQ96S21 281 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 SRSF8Q9BRL6 282 aaKnown RBP9.48□□□□□ -0.89
UPF3A-210ENST00000493727 TSSC4Q9Y5U2 329 aaPredicted RBP9.48□□□□□ -0.89
UPF3A-210ENST00000493727 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
UPF3A-210ENST00000493727 TRAV41A0A0B4J266 112 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 E7EUB6 86 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 H3BP45 60 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 SMLR1H3BR10 107 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 DEDDO75618 318 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 LY86O95711 162 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 IFNA10P01566 189 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 DEFA4P12838 97 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 SNCAP37840 140 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 RPL23AP62750 156 aaKnown RBP9.47□□□□□ -0.89
UPF3A-210ENST00000493727 RPP30P78346 268 aaKnown RBP9.47□□□□□ -0.89
UPF3A-210ENST00000493727 IL15RAQ13261 267 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 TMEM95Q3KNT9 176 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 LFNGQ8NES3 379 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 DCUN1D4Q92564 292 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 GON7Q9BXV9 100 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 PSENENQ9NZ42 101 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 MBD2Q9UBB5 411 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 LINC00527Q9UJ94 153 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 FBXO7Q9Y3I1 522 aa9.47□□□□□ -0.89
UPF3A-210ENST00000493727 RYR2Q92736 4967 aa9.46□□□□□ -0.89
UPF3A-210ENST00000493727 FXYD6-FXYD2A0A087WZ82 144 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 A0A1B0GW64 132 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 A0A1W2PRX2 142 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 IGLC7A0M8Q6 106 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 CGB1A6NKQ9 187 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 LINC01548A6NM66 108 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 E5RGE8 158 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 AREGP15514 252 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 NUP62P37198 522 aaPredicted RBP9.46□□□□□ -0.9
UPF3A-210ENST00000493727 CAV2P51636 162 aa9.46□□□□□ -0.9
UPF3A-210ENST00000493727 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.9
UPF3A-210ENST00000493727 WT1-ASQ06250 92 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms