RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SLC35B3Q9H1N7 401 aa7.3□□□□□ -1.24
SMARCC1-208ENST00000492896 A0A1W2PPV4 95 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 ZFP92A6NM28 416 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 FCN1O00602 326 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 HMGB3O15347 200 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 EIF3GO75821 320 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 SNAPINO95295 136 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 MSMBP08118 114 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 SRP19P09132 144 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 FAM106CPP0CH98 169 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 OR10J1P30954 320 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 TAGLN2P37802 199 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 PRR20EP86478 221 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 PRR20CP86479 221 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 PRR20DP86480 221 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 PRR20BP86481 221 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 PRR20AP86496 221 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 PMS2P11Q13670 270 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 GCSAMLQ5JQS6 135 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 OR1P1Q8NH06 330 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 RXFP4Q8TDU9 374 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 C22orf15Q8WYQ4 148 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 MISP3Q96FF7 219 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 ACY3Q96HD9 319 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 MANBALQ9NQG1 85 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 C1RLQ9NZP8 487 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 SLC45A2Q9UMX9 530 aa7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 F11RQ9Y624 299 aaKnown RBP7.29□□□□□ -1.24
SMARCC1-208ENST00000492896 TRAV40A0A0B4J280 105 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 IGHV1-69DA0A0B4J2H0 117 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 CENPVL3A0A0U1RRI6 287 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 IGHV1-69P01742 117 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 APELAP0DMC3 54 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 RHOBP62745 196 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 FXYD3Q14802 87 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 RUSC1-AS1Q66K80 236 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 ATRAIDQ6UW56 229 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 RBMS3Q6XE24 437 aaKnown RBP7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 CYP2G1PQ6ZSU1 146 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 IQCF2Q8IXL9 164 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 THAP8Q8NA92 274 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 OR2T6Q8NHC8 308 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 AJUBAQ96IF1 538 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 FNDC4Q9H6D8 234 aaPredicted RBP7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 BEX4Q9NWD9 120 aaPredicted RBP7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 VAX2Q9UIW0 290 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 SPTAN1Q13813 2472 aaKnown RBP7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 MED13LQ71F56 2210 aa7.28□□□□□ -1.24
SMARCC1-208ENST00000492896 CR1P17927 2039 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 IGKV1OR2-108A0A075B7D4 117 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 TRAV20A0A0B4J274 112 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 NCBP2LA6PVI3 153 aaKnown RBP7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 B4DSR2 109 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 LINC00869P0C866 280 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 STAG3L2P0CL84 134 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 STAG3L3P0CL85 134 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 DEFA4P12838 97 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 PLA2G2AP14555 144 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 COL8A1P27658 744 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 PSMB3P49720 205 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 RND2P52198 227 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 MFAP2P55001 183 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 BTN1A1Q13410 526 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 MLANAQ16655 118 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 TMEM249Q2WGJ8 235 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 SOHLH1Q5JUK2 328 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 C19orf35Q6ZS72 473 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 PIP4P2Q8N4L2 257 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 CLRN3Q8NCR9 226 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 OR1L6Q8NGR2 347 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 NPIPB3Q92617 1050 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 ARPC1AQ92747 370 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 MYO18BQ8IUG5 2567 aa7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 UBR5O95071 2799 aaPredicted RBP7.27□□□□□ -1.25
SMARCC1-208ENST00000492896 IGHV3OR16-10A0A075B7F0 116 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 J3QKU1 62 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 NDUFS6O75380 124 aaKnown RBP7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 CXorf1O96002 111 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 MT-CO2P00403 227 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 CRYGCP07315 174 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 CTRB1P17538 263 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 GATA3P23771 443 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 NPBWR1P48145 328 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 CEBPGP53567 150 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 SELENOTP62341 195 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 FAM120AOSQ5T036 256 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 CTRB2Q6GPI1 263 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 SLC35E3Q7Z769 313 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 LRRC75A-AS1Q8N1F1 130 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 CYB561D1Q8N8Q1 229 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 Q8N9W7 124 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 RNF2Q99496 336 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 SLC25A33Q9BSK2 321 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 TMPRSS5Q9H3S3 457 aa7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 MRPL36Q9P0J6 103 aaKnown RBP7.26□□□□□ -1.25
SMARCC1-208ENST00000492896 EPG5Q9HCE0 2579 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms