RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TP53TG1	Q9Y2A0	90 aa		11.42	□□□□□ -0.58
MRPL55-231	ENST00000492170	CXorf65	A6NEN9	183 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	NDUFA4	O00483	81 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	KRAS	P01116	189 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	CTSD	P07339	412 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	PGAM2	P15259	253 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	LPAR6	P43657	344 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	PIGP	P57054	158 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	PMS2P11	Q13670	270 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170		Q6ZWC4	215 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	OR13C8	Q8NGS7	320 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	ZFAND1	Q8TCF1	268 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	MARCH1	Q8TCQ1	289 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	DEDD2	Q8WXF8	326 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	PRRT1	Q99946	306 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	C20orf24	Q9BUV8	137 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	UBQLN2	Q9UHD9	624 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	OR51B2	Q9Y5P1	312 aa		11.41	□□□□□ -0.58
MRPL55-231	ENST00000492170	IGHV3-21	A0A0B4J1V1	117 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	UBE2C	O00762	179 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	SPRY2	O43597	315 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	PI3	P19957	117 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	BMI1	P35226	326 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	G6PC	P35575	357 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170		Q56UQ5	140 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	WFDC3	Q8IUB2	231 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	UBAC2	Q8NBM4	344 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	OR51S1	Q8NGJ8	323 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	SCARB1	Q8WTV0	552 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	LINC00476	Q8WZB0	136 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	TMEM56	Q96MV1	263 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	FKBP11	Q9NYL4	201 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	PRND	Q9UKY0	176 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170	NSG2	Q9Y328	171 aa		11.4	□□□□□ -0.58
MRPL55-231	ENST00000492170		A0A0J9YWU9	116 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	NUPR2	A6NF83	97 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	OR4C46	A6NHA9	309 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170		K7EIM0	57 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170		K7EMT4	169 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	IGKV1-39	P01597	117 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	IGKV1D-39	P04432	117 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	MFAP2	P55001	183 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	AP3S2	P59780	193 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	TNFRSF9	Q07011	255 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	DEFB135	Q30KP9	77 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	LYG2	Q86SG7	212 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	TOMM5	Q8N4H5	51 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	STPG3	Q8N7X2	389 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	OR5B3	Q8NH48	314 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	TSC22D3	Q99576	134 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	SDHC	Q99643	169 aa	Predicted RBP	11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	CHRDL1	Q9BU40	450 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	GPR132	Q9UNW8	380 aa		11.39	□□□□□ -0.59
MRPL55-231	ENST00000492170	IGHV3OR16-8	A0A075B7F1	116 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	KIR2DL5B	A0A0G2JN68	375 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	KIR2DL5B	A0A0G2JPC4	375 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	C15orf62	A8K5M9	175 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170		F8W735	103 aa	Predicted RBP	11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	ZNF207	O43670	478 aa	Known RBP	11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	FAU	P35544	74 aa	Known RBP	11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	REL	Q04864	619 aa	Predicted RBP	11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	ODF3L2	Q3SX64	289 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	LINC00299	Q6ZSB3	139 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	KIR2DL5A	Q8N109	375 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	CCDC71L	Q8N9Z2	235 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	KIR2DL5B	Q8NHK3	375 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	SEC22A	Q96IW7	307 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	TP53RK	Q96S44	253 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	COPZ2	Q9P299	210 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	SCP2D1	Q9UJQ7	156 aa		11.38	□□□□□ -0.59
MRPL55-231	ENST00000492170	C3orf85	A0A1B0GTC6	90 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	C15orf61	A6NNL5	157 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	NUPL2	O15504	423 aa	Known RBP	11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	B3GALNT1	O75752	331 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	ADM	P35318	185 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	BAK1	Q16611	211 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	OR1P1	Q8NH06	330 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	TMEM14B	Q9NUH8	114 aa		11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	C14orf166	Q9Y224	244 aa	Known RBP	11.37	□□□□□ -0.59
MRPL55-231	ENST00000492170	LY6G6C	O95867	125 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	RPL35A	P18077	110 aa	Known RBP	11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	ATF4	P18848	351 aa	Predicted RBP	11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	UCP1	P25874	307 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	CNPY1	Q3B7I2	92 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	TMEM217	Q8N7C4	229 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	RNF183	Q96D59	192 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	MISP3	Q96FF7	219 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	GALNT14	Q96FL9	552 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	MCUB	Q9NWR8	336 aa		11.36	□□□□□ -0.59
MRPL55-231	ENST00000492170	CRYM-AS1	A6NIL9	109 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	DBX1	A6NMT0	343 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170		P0C879	139 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	MFAP4	P55083	255 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	OR4A16	Q8NH70	328 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	TMEM230	Q96A57	120 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	SCGB3A2	Q96PL1	93 aa		11.35	□□□□□ -0.59
MRPL55-231	ENST00000492170	NAA60	Q9H7X0	242 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms