RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CLDN12P56749 244 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 SNAP25P60880 206 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 FABP5Q01469 135 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 KMT2AQ03164 3969 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 PABPC1L2AQ5JQF8 200 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 DNM1P34Q6PK57 102 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 Q6ZTI0 123 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 SLC35E3Q7Z769 313 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 LHFPL1Q86WI0 220 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 CD302Q8IX05 232 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 DDX60Q8IY21 1712 aaKnown RBP1.36□□□□□ -2.19
VTA1-204ENST00000491881 C1orf174Q8IYL3 243 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 DAND5Q8N907 189 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 C12orf43Q96C57 262 aaKnown RBP1.36□□□□□ -2.19
VTA1-204ENST00000491881 SLC22A4Q9H015 551 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 WDR54Q9H977 334 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 PRO2289Q9P1D8 64 aa1.36□□□□□ -2.19
VTA1-204ENST00000491881 AFDNP55196 1824 aaKnown RBP1.36□□□□□ -2.19
VTA1-204ENST00000491881 NRXN2Q9P2S2 1712 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 ATG2BQ96BY7 2078 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 TRAV41A0A0B4J266 112 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 TEX50A0A1B0GTY4 177 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 LINC00854A0A1B0GVQ3 168 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 C5orf49A4QMS7 147 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 FABP12A6NFH5 140 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 LOC730098B7Z3J9 87 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 M0R381 172 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 MT-CO2P00403 227 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 HIST1H1CP16403 213 aaKnown RBP1.35□□□□□ -2.19
VTA1-204ENST00000491881 CXCL3P19876 107 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 CD24P25063 80 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 RELAQ04206 551 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 EBPQ15125 230 aaKnown RBP1.35□□□□□ -2.19
VTA1-204ENST00000491881 FUNDC1Q8IVP5 155 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 SLC37A2Q8TED4 501 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 PACRGQ96M98 296 aaPredicted RBP1.35□□□□□ -2.19
VTA1-204ENST00000491881 TMEM109Q9BVC6 243 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 MS4A6AQ9H2W1 248 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 TAAR3PQ9P1P4 343 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 PCYT1BQ9Y5K3 369 aaPredicted RBP1.35□□□□□ -2.19
VTA1-204ENST00000491881 CCDC141Q6ZP82 1450 aa1.35□□□□□ -2.19
VTA1-204ENST00000491881 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
VTA1-204ENST00000491881 TRGV5A0A0B4J1U4 118 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 A0A1B0GVG6 124 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 RFPL4AA6NLU0 287 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 RFPL4AL1F8VTS6 287 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 HLA-DQB2P05538 268 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 BPGMP07738 259 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 PRB4P10163 310 aaPredicted RBP1.34□□□□□ -2.19
VTA1-204ENST00000491881 UGT2B7P16662 529 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 PSMB6P28072 239 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 IFNGR2P38484 337 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 RPL27AP46776 148 aaKnown RBP1.34□□□□□ -2.19
VTA1-204ENST00000491881 GABRA2P47869 451 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 RPL14P50914 215 aaKnown RBP1.34□□□□□ -2.19
VTA1-204ENST00000491881 UBE2G2P60604 165 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 SKP1P63208 163 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 HOXC5Q00444 222 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 PLEKHG7Q6ZR37 379 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 C10orf126Q8N4M7 172 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 CLDND2Q8NHS1 167 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 SMCR5Q8TEV8 140 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 DNAJB3Q8WWF6 145 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 SFRP2Q96HF1 295 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 TIMM21Q9BVV7 248 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 TMEM222Q9H0R3 208 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 GBF1Q92538 1859 aa1.34□□□□□ -2.19
VTA1-204ENST00000491881 COL4A2P08572 1712 aa1.34□□□□□ -2.2
VTA1-204ENST00000491881 ARFGEF2Q9Y6D5 1785 aa1.34□□□□□ -2.2
VTA1-204ENST00000491881 A0A1W2PP64 1363 aa1.34□□□□□ -2.2
VTA1-204ENST00000491881 SORL1Q92673 2214 aa1.34□□□□□ -2.2
VTA1-204ENST00000491881 HMCN2Q8NDA2 5059 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 ARHGAP32A7KAX9 2087 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 NAIPQ13075 1403 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 SRRM2Q9UQ35 2752 aaKnown RBP1.33□□□□□ -2.2
VTA1-204ENST00000491881 IGKV2-29A2NJV5 120 aaPredicted RBP1.33□□□□□ -2.2
VTA1-204ENST00000491881 OR6C6A6NF89 314 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 NPYP01303 97 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 RBM11P57052 281 aaKnown RBP1.33□□□□□ -2.2
VTA1-204ENST00000491881 TBPL1P62380 186 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 HLA-DRB3P79483 266 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 SPATA12Q7Z6I5 190 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 LRRC28Q86X40 367 aaPredicted RBP1.33□□□□□ -2.2
VTA1-204ENST00000491881 PACRGLQ8N7B6 248 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 OR8B12Q8NGG6 310 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 OR13C8Q8NGS7 320 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 ASB13Q8WXK3 278 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 SMIM19Q96E16 107 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 HES4Q9HCC6 221 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 DOK5Q9P104 306 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 HHLA3Q9XRX5 114 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 PKHD1P08F94 4074 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 RAD50Q92878 1312 aa1.33□□□□□ -2.2
VTA1-204ENST00000491881 RIC1Q4ADV7 1423 aa1.32□□□□□ -2.2
VTA1-204ENST00000491881 SDK1Q7Z5N4 2213 aa1.32□□□□□ -2.2
VTA1-204ENST00000491881 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
VTA1-204ENST00000491881 TMSB15BA0A087X1C1 80 aa1.32□□□□□ -2.2
VTA1-204ENST00000491881 TINCRA0A1B0GVN0 87 aa1.32□□□□□ -2.2
VTA1-204ENST00000491881 BHLHE40O14503 412 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms