RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 RGS21Q2M5E4 152 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 C15orf32Q32M92 178 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 PVRIGQ6DKI7 326 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 C12orf45Q8N5I9 185 aaPredicted RBP11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 OR1S1Q8NH92 325 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 WWC2-AS2Q96NR7 200 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 LSM4Q9Y4Z0 139 aaKnown RBP11.56□□□□□ -0.56
CDC42SE1-205ENST00000491825 MPTX1A8MV57 137 aa11.55□□□□□ -0.56
CDC42SE1-205ENST00000491825 OR2J3O76001 311 aa11.55□□□□□ -0.56
CDC42SE1-205ENST00000491825 MFAP2P55001 183 aa11.55□□□□□ -0.56
CDC42SE1-205ENST00000491825 ZNF343Q6P1L6 599 aa11.55□□□□□ -0.56
CDC42SE1-205ENST00000491825 ZMAT5Q9UDW3 170 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-205ENST00000491825 FBXL7Q9UJT9 491 aa11.55□□□□□ -0.56
CDC42SE1-205ENST00000491825 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 CEBPZOSA8MTT3 80 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 HTR2BP41595 481 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 DEFA5Q01523 94 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 ATP5G2Q06055 141 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 OR4D5Q8NGN0 318 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 DTD1Q8TEA8 209 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 CXorf58Q96LI9 332 aa11.54□□□□□ -0.56
CDC42SE1-205ENST00000491825 CORTO00230 105 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 MED6O75586 246 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 NDUFB8O95169 186 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 LY86O95711 162 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 IGHV3-11P01762 117 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 RNASE2P10153 161 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 SNCAP37840 140 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 EXOSC2Q13868 293 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 TATDN3Q17R31 274 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 IAH1Q2TAA2 248 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 C9orf66Q5T8R8 295 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 SLC24A4Q8NFF2 622 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 OR5B12Q96R08 314 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 ATP6V0BQ99437 205 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 HIPK2Q9H2X6 1198 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 RBKSQ9H477 322 aa11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-205ENST00000491825 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 TRBV7-1A0A0A6YYK4 115 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 NXPH3O95157 252 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 HSPB1P04792 205 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 ATP5IP56385 69 aaPredicted RBP11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 ID3Q02535 119 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 ZNF616Q08AN1 781 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 OXA1LQ15070 435 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 ZBTB8BQ8NAP8 495 aaPredicted RBP11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 EEF1AKMT3Q96AZ1 226 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 CIB3Q96Q77 187 aaPredicted RBP11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 PRR25Q96S07 402 aa11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 RANGRFQ9HD47 186 aaPredicted RBP11.52□□□□□ -0.57
CDC42SE1-205ENST00000491825 DNAH7Q8WXX0 4024 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 MFSD2BA6NFX1 497 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 SEC14L6B5MCN3 397 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 LINC01619G3V211 115 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 K7EIM0 57 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 CCSO14618 274 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 SYNGR2O43760 224 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 OR8U8P0C7N1 319 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 NHLRC4P0CG21 123 aaPredicted RBP11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 NKX2-1P43699 371 aaPredicted RBP11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 C2orf83Q53S99 150 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 SLC25A24Q6NUK1 477 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 NOXA1Q86UR1 476 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 OR1N2Q8NGR9 330 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 ZNF502Q8TBZ5 544 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 CCDC140Q96MF4 163 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 PEF1Q9UBV8 284 aaKnown RBP11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 U3KQ87 197 aa11.51□□□□□ -0.57
CDC42SE1-205ENST00000491825 STAB2Q8WWQ8 2551 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 A0A087WW49 117 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 I3L2K1 104 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 ZP3P21754 424 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 NPY1RP25929 384 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 FCGR2BP31994 310 aaPredicted RBP11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 RNASEH2CQ8TDP1 164 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 TMEM170AQ8WVE7 144 aa11.5□□□□□ -0.57
CDC42SE1-205ENST00000491825 TRBV12-3P01733 135 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 GSG1LQ6UXU4 331 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 SCARB1Q8WTV0 552 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 MISP3Q96FF7 219 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 C2orf50Q96LR7 162 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 ALG5Q9Y673 324 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 U3KQK5 164 aa11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 DYNC2H1Q8NCM8 4307 aaKnown RBP11.49□□□□□ -0.57
CDC42SE1-205ENST00000491825 ANKRD34BA5PLL1 514 aa11.48□□□□□ -0.57
CDC42SE1-205ENST00000491825 C5orf51A6NDU8 294 aa11.48□□□□□ -0.57
CDC42SE1-205ENST00000491825 FAM25EA8MYX2 175 aa11.48□□□□□ -0.57
CDC42SE1-205ENST00000491825 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
CDC42SE1-205ENST00000491825 BMPR1BO00238 502 aa11.48□□□□□ -0.57
CDC42SE1-205ENST00000491825 SSNA1O43805 119 aa11.48□□□□□ -0.57
CDC42SE1-205ENST00000491825 MT-CO2P00403 227 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms