RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 SRSF8Q9BRL6 282 aaKnown RBP8.66□□□□□ -1.02
USP4-214ENST00000491791 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
USP4-214ENST00000491791 CHODLQ9H9P2 273 aa8.66□□□□□ -1.02
USP4-214ENST00000491791 PATZ1Q9HBE1 687 aaKnown RBP8.66□□□□□ -1.02
USP4-214ENST00000491791 ZFHX3Q15911 3703 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 ITPR3Q14573 2671 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 TRBV24-1A0A075B6N3 115 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 PPIAL4CA0A0B4J2A2 164 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 C19orf84I3L1E1 186 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 LIPFP07098 398 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 PPIAL4GP0DN37 164 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 CD99P14209 185 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 AREGP15514 252 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 AKR1C3P42330 323 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 DIAPH2-AS1Q14236 149 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 GAMTQ14353 236 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 HNF4GQ14541 408 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 ELOBQ15370 118 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 PRSS8Q16651 343 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 MMD2Q8IY49 270 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 FAM24BQ8N5W8 94 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 KIR3DL3Q8N743 410 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 STPG3Q8N7X2 389 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 THAP8Q8NA92 274 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 OR4P4Q8NGL7 312 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 PYGO2Q9BRQ0 406 aa8.65□□□□□ -1.02
USP4-214ENST00000491791 ZNF430Q9H8G1 570 aaPredicted RBP8.65□□□□□ -1.02
USP4-214ENST00000491791 MED13LQ71F56 2210 aa8.65□□□□□ -1.03
USP4-214ENST00000491791 YLPM1P49750 1951 aaKnown RBP8.64□□□□□ -1.03
USP4-214ENST00000491791 IGKV1OR2-108A0A075B7D4 117 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 IGHV1-3A0A0C4DH29 117 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 PSMB11A5LHX3 300 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 A6NNC1 897 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 LYNX1G3V0Z9 82 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 CLDN34H7C241 214 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 PAGE4O60829 102 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 MT-CO2P00403 227 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 OR5G3P0C626 314 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 LYNX1P0DP58 116 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 MYOD1P15172 320 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 WT1-ASQ06250 92 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 GCSAMLQ5JQS6 135 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 ABHD5Q8WTS1 349 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 ISOC2Q96AB3 205 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
USP4-214ENST00000491791 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 C11orf94C9JXX5 98 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 IGHV2-5P01817 119 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 OPN1MWP04001 364 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 SOD3P08294 240 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 OPN1MW2P0DN77 364 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 OPN1MW3P0DN78 364 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 IGFBP2P18065 325 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 NPPCP23582 126 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 PRTN3P24158 256 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 REG1BP48304 166 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 SELENOTP62341 195 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 RPL23P62829 140 aaKnown RBP8.63□□□□□ -1.03
USP4-214ENST00000491791 PSG5Q15238 335 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 ETFRF1Q6IPR1 90 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 SLC16A13Q7RTY0 426 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 OR10W1Q8NGF6 305 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 GATAD1Q8WUU5 269 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 MRPL32Q9BYC8 188 aaKnown RBP8.63□□□□□ -1.03
USP4-214ENST00000491791 PARLQ9H300 379 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 FUT9Q9Y231 359 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 LY96Q9Y6Y9 160 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 NF1P21359 2839 aa8.63□□□□□ -1.03
USP4-214ENST00000491791 AKAP9Q99996 3911 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 IGLC7A0M8Q6 106 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 ODF3BA8MYP8 253 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 OOSP1A8MZH6 123 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 C22orf46C9J442 243 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 E7EUB6 86 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 CORTO00230 105 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 PFN1P07737 140 aaKnown RBP8.62□□□□□ -1.03
USP4-214ENST00000491791 ARL14EPLP0DKL9 152 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 GCHFRP30047 84 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 KRTAP10-9P60411 292 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 AKIRIN2Q53H80 203 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 PQLC2Q6ZP29 291 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 OR4F5Q8NH21 305 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 Q8WTZ3 238 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 RITA1Q96K30 269 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 OR4F4Q96R69 305 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 IMMP2LQ96T52 175 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 HINT2Q9BX68 163 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 SEPSECSQ9HD40 501 aaKnown RBP8.62□□□□□ -1.03
USP4-214ENST00000491791 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
USP4-214ENST00000491791 METTL1Q9UBP6 276 aaKnown RBP8.62□□□□□ -1.03
USP4-214ENST00000491791 INSIG2Q9Y5U4 225 aa8.62□□□□□ -1.03
USP4-214ENST00000491791 LOC105371242A0A075B767 164 aa8.61□□□□□ -1.03
USP4-214ENST00000491791 A0A1W2PPI3 338 aa8.61□□□□□ -1.03
USP4-214ENST00000491791 C9JCJ5 164 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms