RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
USP39-217ENST00000491659 DHODHQ02127 395 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 FAM219AQ8IW50 185 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
USP39-217ENST00000491659 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 RTBDNQ9BSG5 229 aaPredicted RBP11.37□□□□□ -0.59
USP39-217ENST00000491659 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 DAZ1Q9NQZ3 744 aaKnown RBP11.37□□□□□ -0.59
USP39-217ENST00000491659 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
USP39-217ENST00000491659 TRAV25A0A0B4J276 109 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 A0A0B4J293 547 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
USP39-217ENST00000491659 I3L2K1 104 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 NUPL2O15504 423 aaKnown RBP11.36□□□□□ -0.59
USP39-217ENST00000491659 CDS2O95674 445 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 MT-CO2P00403 227 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 CD7P09564 240 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 C8orf88P0DMB2 117 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 S100A5P33763 92 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 FAUP35544 74 aaKnown RBP11.36□□□□□ -0.59
USP39-217ENST00000491659 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
USP39-217ENST00000491659 MFAP4P55083 255 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 RELQ04864 619 aaPredicted RBP11.36□□□□□ -0.59
USP39-217ENST00000491659 ANKRD55Q3KP44 614 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 RBPMS2Q6ZRY4 209 aaKnown RBP11.36□□□□□ -0.59
USP39-217ENST00000491659 S100ZQ8WXG8 99 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 RBPMSQ93062 196 aaKnown RBP11.36□□□□□ -0.59
USP39-217ENST00000491659 TXN2Q99757 166 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 SOSTQ9BQB4 213 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 SPATA25Q9BR10 227 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 CHRDL1Q9BU40 450 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 C20orf24Q9BUV8 137 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 GPR132Q9UNW8 380 aa11.36□□□□□ -0.59
USP39-217ENST00000491659 A0A0G2JRQ6 117 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 OR11H12B2RN74 326 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 INS-IGF2F8WCM5 200 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
USP39-217ENST00000491659 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
USP39-217ENST00000491659 ADMP35318 185 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 HAGHQ16775 308 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 PYDC2Q56P42 97 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 OR52B4Q8NGK2 314 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 GLYATL2Q8WU03 294 aa11.35□□□□□ -0.59
USP39-217ENST00000491659 CORTO00230 105 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 GNG7O60262 68 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 ETV6P41212 452 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 AP3S2P59780 193 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 ZNF846Q147U1 533 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 TMEM268Q5VZI3 342 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 LHFPL5Q8TAF8 219 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
USP39-217ENST00000491659 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 SRD5A3Q9H8P0 318 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
USP39-217ENST00000491659 KCNIP3Q9Y2W7 256 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 HUWE1Q7Z6Z7 4374 aaKnown RBP11.34□□□□□ -0.59
USP39-217ENST00000491659 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
USP39-217ENST00000491659 C15orf62A8K5M9 175 aa11.33□□□□□ -0.6
USP39-217ENST00000491659 K7EMT4 169 aa11.33□□□□□ -0.6
USP39-217ENST00000491659 CTSGP08311 255 aa11.33□□□□□ -0.6
USP39-217ENST00000491659 LAMTOR1Q6IAA8 161 aa11.33□□□□□ -0.6
USP39-217ENST00000491659 SELENOHQ8IZQ5 122 aaKnown RBP11.33□□□□□ -0.6
USP39-217ENST00000491659 DUSP18Q8NEJ0 188 aa11.33□□□□□ -0.6
USP39-217ENST00000491659 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
USP39-217ENST00000491659 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
USP39-217ENST00000491659 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 C3orf84H3BNL1 204 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 ZNF207O43670 478 aaKnown RBP11.32□□□□□ -0.6
USP39-217ENST00000491659 YIF1AO95070 293 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 RNASE2P10153 161 aaKnown RBP11.32□□□□□ -0.6
USP39-217ENST00000491659 NPBWR1P48145 328 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 SPCS3P61009 180 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 TOMM5Q8N4H5 51 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 OR52E5Q8NH55 327 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 IL22RA2Q969J5 263 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 TRIM63Q969Q1 353 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 CACNG5Q9UF02 275 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 TMEM56-RWDD3S4R434 201 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 V9GYH0 126 aa11.32□□□□□ -0.6
USP39-217ENST00000491659 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 ANXA3P12429 323 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 AKR1C4P17516 323 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 OPRK1P41145 380 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 KLF9Q13886 244 aaPredicted RBP11.31□□□□□ -0.6
USP39-217ENST00000491659 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 Q6ZRM9 215 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 MUC7Q8TAX7 377 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 CITED4Q96RK1 184 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
USP39-217ENST00000491659 CEBPZOSA8MTT3 80 aa11.3□□□□□ -0.6
USP39-217ENST00000491659 TSPAN4O14817 238 aa11.3□□□□□ -0.6
USP39-217ENST00000491659 SULT1A3P0DMM9 295 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms