RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 CNIH1O95406 144 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 MT-CO2P00403 227 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 M6PRP20645 277 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 BPIFB3P59826 476 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 PAX8Q06710 450 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 MMDQ15546 238 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 GUK1Q16774 197 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 BSXQ3C1V8 233 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 FFAR4Q5NUL3 377 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 TMEM144Q7Z5S9 345 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 OR10G7Q8NGN6 311 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 NANPQ8TBE9 248 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 C19orf24Q9BVV8 132 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 HIF1ANQ9NWT6 349 aa8.23□□□□□ -1.09
HDAC3-210ENST00000490808 CTXND1A0A1B0GTU2 59 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 FAM157AC9JC47 383 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 PRSS46E5RG02 174 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 F8W036 122 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 NPFFO15130 113 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 NDUFA3O95167 84 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 IGKV1D-33P01593 117 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 IGKV1-33P01594 117 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 OPN1MWP04001 364 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 CRYGBP07316 175 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 OPN1MW2P0DN77 364 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 OPN1MW3P0DN78 364 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 OR13C7P0DN81 318 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 RNASE2P10153 161 aaKnown RBP8.22□□□□□ -1.09
HDAC3-210ENST00000490808 MDKP21741 143 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-210ENST00000490808 CD69Q07108 199 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 KLRD1Q13241 179 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 EBI3Q14213 229 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 SSX2Q16385 188 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 HCP5Q6MZN7 132 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 SVBPQ8N300 66 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 ZNF114Q8NC26 417 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 BPIFCQ8NFQ6 507 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 CFHR4Q92496 578 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 SEC11CQ9BY50 192 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
HDAC3-210ENST00000490808 RBFOX3A6NFN3 312 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 SCGB2A1O75556 95 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 TMEM11P17152 192 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 RPL29P47914 159 aaKnown RBP8.21□□□□□ -1.1
HDAC3-210ENST00000490808 ELLP55199 621 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-210ENST00000490808 GNB1P62873 340 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 PMS2P11Q13670 270 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 KHDC3LQ587J8 217 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 LHFPL4Q7Z7J7 247 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 MAPK1IP1LQ8NDC0 245 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 OR1P1Q8NH06 330 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 EAF1Q96JC9 268 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-210ENST00000490808 TBX15Q96SF7 602 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 RNF2Q99496 336 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 FBXL15Q9H469 300 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 RPRMQ9NS64 109 aa8.21□□□□□ -1.1
HDAC3-210ENST00000490808 A0A1W2PRD5 423 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 A0A1W2PRF3 423 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 A0A1W2PRM7 423 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 MAP1LC3B2A6NCE7 125 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 NCBP2LA6PVI3 153 aaKnown RBP8.2□□□□□ -1.1
HDAC3-210ENST00000490808 AGPAT2O15120 278 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 NDUFS6O75380 124 aaKnown RBP8.2□□□□□ -1.1
HDAC3-210ENST00000490808 SNAPINO95295 136 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 APOC3P02656 99 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 CD5P06127 495 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 FABP1P07148 127 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 CDC34P49427 236 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-210ENST00000490808 FHITP49789 147 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 DLX1P56177 255 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 SELENOTP62341 195 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 HNF4GQ14541 408 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 ABHD5Q8WTS1 349 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 SRSF12Q8WXF0 261 aaKnown RBP8.2□□□□□ -1.1
HDAC3-210ENST00000490808 LINC00052Q96N35 136 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 P2RX4Q99571 388 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 RASL11BQ9BPW5 248 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 MAP1LC3BQ9GZQ8 125 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 SLC35B3Q9H1N7 401 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 MANBALQ9NQG1 85 aa8.2□□□□□ -1.1
HDAC3-210ENST00000490808 IGHV1-69DA0A0B4J2H0 117 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 CRLF1O75462 422 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 IGHV1-69P01742 117 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 HSPB1P04792 205 aaKnown RBP8.19□□□□□ -1.1
HDAC3-210ENST00000490808 DEFA4P12838 97 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 PSMB3P49720 205 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 B2MP61769 119 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 RHOBP62745 196 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 DEFA5Q01523 94 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 FXYD3Q14802 87 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 C5orf64Q2M2E5 130 aa8.19□□□□□ -1.1
HDAC3-210ENST00000490808 ARSJQ5FYB0 599 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-210ENST00000490808 ZNF562Q6V9R5 426 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms