RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 DUTP33316 252 aaKnown RBP10.67□□□□□ -0.7
SHOX2-205ENST00000490689 LHX2P50458 406 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 GFRA1P56159 465 aa10.67□□□□□ -0.7
SHOX2-205ENST00000490689 SLC25A17O43808 307 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 MLANAQ16655 118 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 FAM214BQ7L5A3 538 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 TNFRSF19Q9NS68 423 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 HILPDAQ9Y5L2 63 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 NDUFB3O43676 98 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 PRRX1P54821 245 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 Q6P435 159 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 FOXL2NBQ6ZUU3 175 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 WFDC3Q8IUB2 231 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 RNF7Q9UBF6 113 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 JPT1Q9UK76 154 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 OBSL1O75147 1896 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 PLP1P60201 277 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 ARF6P62330 175 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 CLEC7AQ9BXN2 247 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 LOC102723996A0A087X1L8 192 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 IZUMO1RA6ND01 250 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 K7ESF4 209 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 HYPMO75409 117 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 GCSHP23434 173 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 LMO1P25800 156 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 TSPOP30536 169 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 HBBP68871 147 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 RIGQ13278 110 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 Q6ZS49 121 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 LOXL4Q96JB6 756 aa10.66□□□□□ -0.7
SHOX2-205ENST00000490689 A0A1B0GWJ7 208 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 CLDN18P56856 261 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 LINC00305Q7Z4B0 112 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 AAMDCQ9H7C9 122 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 A0A1W2PS18 150 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 ETV2O00321 342 aaPredicted RBP10.65□□□□□ -0.7
SHOX2-205ENST00000490689 PEX7O00628 323 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 TYMSP04818 313 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 NPPCP23582 126 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 SRSF7Q16629 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
SHOX2-205ENST00000490689 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 GOLT1AQ6ZVE7 132 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.7
SHOX2-205ENST00000490689 ZNF430Q9H8G1 570 aaPredicted RBP10.65□□□□□ -0.7
SHOX2-205ENST00000490689 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.71
SHOX2-205ENST00000490689 ZNF138P52744 262 aa10.65□□□□□ -0.71
SHOX2-205ENST00000490689 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.71
SHOX2-205ENST00000490689 OR10W1Q8NGF6 305 aa10.65□□□□□ -0.71
SHOX2-205ENST00000490689 FNDC4Q9H6D8 234 aaPredicted RBP10.65□□□□□ -0.71
SHOX2-205ENST00000490689 OSTCQ9NRP0 149 aa10.65□□□□□ -0.71
SHOX2-205ENST00000490689 COL6A6A6NMZ7 2263 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 SH2D7A6NKC9 451 aaPredicted RBP10.64□□□□□ -0.71
SHOX2-205ENST00000490689 LGALS4P56470 323 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 BHLHA15Q7RTS1 189 aaPredicted RBP10.64□□□□□ -0.71
SHOX2-205ENST00000490689 VSTM2AQ8TAG5 236 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 B3GALT5-AS1P59052 145 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 ZFP36L1Q07352 338 aaKnown RBP10.64□□□□□ -0.71
SHOX2-205ENST00000490689 AP5S1Q9NUS5 200 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 HTTP42858 3142 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 UBE2V1Q13404 147 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 ZNF146Q15072 292 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 LRRC10Q5BKY1 277 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 PMS2CLQ68D20 193 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 S100A7AQ86SG5 101 aa10.64□□□□□ -0.71
SHOX2-205ENST00000490689 MORN2Q502X0 79 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 COA6Q5JTJ3 125 aaKnown RBP10.63□□□□□ -0.71
SHOX2-205ENST00000490689 WDR82Q6UXN9 313 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 PPP1R14DQ9NXH3 145 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 DLL1O00548 723 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 ORM1P02763 201 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 TNFRSF1AP19438 455 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 CD24P25063 80 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 TSKUQ8WUA8 353 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 RCHY1Q96PM5 261 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 IFI27L2Q9H2X8 130 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 UNC80Q8N2C7 3258 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 FRMD6-AS1P0C7T7 363 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 CECR9P0C854 216 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 NRN1LQ496H8 165 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 GRAMD2BQ96HH9 432 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 C18orf15Q96N68 181 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 PROK2Q9HC23 129 aa10.63□□□□□ -0.71
SHOX2-205ENST00000490689 MED13Q9UHV7 2174 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 CX3CL1P78423 397 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 PRB3Q04118 309 aaPredicted RBP10.62□□□□□ -0.71
SHOX2-205ENST00000490689 Q6ZPA2 131 aa10.62□□□□□ -0.71
SHOX2-205ENST00000490689 TMEM144Q7Z5S9 345 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms