RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 MFAP4P55083 255 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 NEDD8Q15843 81 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 C11orf45Q8TAV5 145 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 MISP3Q96FF7 219 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 S100A16Q96FQ6 103 aaKnown RBP11.32□□□□□ -0.6
COL2A1-207ENST00000490609 TMEM56Q96MV1 263 aa11.32□□□□□ -0.6
COL2A1-207ENST00000490609 FAM212BQ9NTI7 297 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-207ENST00000490609 MRPL36Q9P0J6 103 aaKnown RBP11.32□□□□□ -0.6
COL2A1-207ENST00000490609 A0A1B0GU03 582 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 TMEM127O75204 238 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 DFFBO76075 338 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 YIF1AO95070 293 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 ATP6V1G2O95670 118 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 RBMY1A1P0DJD3 496 aaKnown RBP11.31□□□□□ -0.6
COL2A1-207ENST00000490609 RBMY1CP0DJD4 496 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 RELQ04864 619 aaPredicted RBP11.31□□□□□ -0.6
COL2A1-207ENST00000490609 RBMY1FQ15415 496 aaKnown RBP11.31□□□□□ -0.6
COL2A1-207ENST00000490609 UBE2NLQ5JXB2 153 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 TCF24Q7RTU0 167 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 Q8NAQ8 132 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 OR5H2Q8NGV7 314 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 GPX8Q8TED1 209 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 FKBP11Q9NYL4 201 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 MUC4Q99102 2169 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 ABCA13Q86UQ4 5058 aa11.31□□□□□ -0.6
COL2A1-207ENST00000490609 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 EIF4EP06730 217 aaKnown RBP11.3□□□□□ -0.6
COL2A1-207ENST00000490609 HSPE1P61604 102 aaKnown RBP11.3□□□□□ -0.6
COL2A1-207ENST00000490609 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 LEMD1Q68G75 181 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 SAMD12Q8N8I0 201 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 YIPF6Q96EC8 236 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
COL2A1-207ENST00000490609 A0A0B4J293 547 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 TMEM50AO95807 157 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 CA1P00915 261 aaPredicted RBP11.29□□□□□ -0.6
COL2A1-207ENST00000490609 IGKV1-5P01602 117 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 PRSS3P35030 304 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
COL2A1-207ENST00000490609 TAS2R46P59540 309 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 DEFB131AP59861 70 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
COL2A1-207ENST00000490609 MLANAQ16655 118 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 MRGPRFQ96AM1 343 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
COL2A1-207ENST00000490609 UCP3P55916 312 aa11.28□□□□□ -0.6
COL2A1-207ENST00000490609 PINX1Q96BK5 328 aaKnown RBP11.28□□□□□ -0.6
COL2A1-207ENST00000490609 C6orf62Q9GZU0 229 aaPredicted RBP11.28□□□□□ -0.6
COL2A1-207ENST00000490609 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
COL2A1-207ENST00000490609 PUS1Q9Y606 427 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL2A1-207ENST00000490609 INS-IGF2F8WCM5 200 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 GNG7O60262 68 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
COL2A1-207ENST00000490609 H2BFWTQ7Z2G1 175 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 TSPAN14Q8NG11 270 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 C2CD4CQ8TF44 421 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 X6R8D5 127 aa11.27□□□□□ -0.61
COL2A1-207ENST00000490609 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
COL2A1-207ENST00000490609 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 K7EQG2 157 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 RNASE2P10153 161 aaKnown RBP11.26□□□□□ -0.61
COL2A1-207ENST00000490609 C4BPBP20851 252 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 TMEM187Q14656 261 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
COL2A1-207ENST00000490609 CROCCP3Q8IVE0 287 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
COL2A1-207ENST00000490609 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
COL2A1-207ENST00000490609 IFNA4P05014 189 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 PPP5CP53041 499 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 KCTD21Q4G0X4 260 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 ZNF600Q6ZNG1 722 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 LHFPL1Q86WI0 220 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 DCANP1Q8TF63 244 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 CMTM3Q96MX0 182 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 TP53RKQ96S44 253 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 HRH4Q9H3N8 390 aa11.25□□□□□ -0.61
COL2A1-207ENST00000490609 A0A0G2JRQ6 117 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 IGLL5B9A064 214 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 M0QYG6 137 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 IGKV1-17P01599 117 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 ELK1P19419 428 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 PI3P19957 117 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 CRYBB3P26998 211 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 TSPAN5P62079 268 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 PAFAH1B2P68402 229 aa11.24□□□□□ -0.61
COL2A1-207ENST00000490609 ERHP84090 104 aaKnown RBP11.24□□□□□ -0.61
COL2A1-207ENST00000490609 BSXQ3C1V8 233 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms