RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 CDKL4Q5MAI5 379 aa0.76□□□□□ -2.29
PRPF4B-207ENST00000490399 HIST2H3PS2Q5TEC6 136 aa0.76□□□□□ -2.29
PRPF4B-207ENST00000490399 SCGB3A1Q96QR1 104 aa0.76□□□□□ -2.29
PRPF4B-207ENST00000490399 GINS4Q9BRT9 223 aa0.76□□□□□ -2.29
PRPF4B-207ENST00000490399 PLXND1Q9Y4D7 1925 aa0.76□□□□□ -2.29
PRPF4B-207ENST00000490399 PIK3R4Q99570 1358 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 A0A087WX48 190 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 TGIF2-C20orf24A0A0A6YYL0 155 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 TRAV1-1A0A0B4J248 108 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 C2orf70A6NJV1 201 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 HBA1P69905 142 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 SPANXN3Q5MJ09 141 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 RPL22L1Q6P5R6 122 aaKnown RBP0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 TMEM86BQ8N661 226 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 DDI1Q8WTU0 396 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 PTH2Q96A98 100 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 LSM5Q9Y4Y9 91 aaKnown RBP0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 LAMA4Q16363 1823 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 HECW1Q76N89 1606 aa0.75□□□□□ -2.29
PRPF4B-207ENST00000490399 MED12Q93074 2177 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 C9orf84Q5VXU9 1444 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 ZNF106Q9H2Y7 1883 aaKnown RBP0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 C19orf84I3L1E1 186 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 TNNC2P02585 160 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 DEFA1P59665 94 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 C8orf74Q6P047 294 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 C1orf158Q8N1D5 194 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 LINC00311Q8N616 119 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 OR4D11Q8NGI4 311 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 DNAJC9Q8WXX5 260 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 SLC35B4Q969S0 331 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 OPTNQ96CV9 577 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 MRPL57Q9BQC6 102 aaKnown RBP0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 C11orf68Q9H3H3 251 aaKnown RBP0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 PKIGQ9Y2B9 76 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 ZFP30Q9Y2G7 519 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 ZFC3H1O60293 1989 aaKnown RBP0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 TOPBP1Q92547 1522 aa0.74□□□□□ -2.29
PRPF4B-207ENST00000490399 UBR4Q5T4S7 5183 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 CALB1P05937 261 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 OR5G3P0C626 314 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 COTL1Q14019 142 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 OOSP2Q86WS3 158 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 OR4E2Q8NGC2 313 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 OR5A1Q8NGJ0 315 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 IMP4Q96G21 291 aaKnown RBP0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 FBXL12Q9NXK8 326 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 USP24Q9UPU5 2620 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 ECM29Q5VYK3 1845 aa0.73□□□□□ -2.29
PRPF4B-207ENST00000490399 DOCK3Q8IZD9 2030 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 MCM3APO60318 1980 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 DENND4CQ5VZ89 1909 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 KCNK1O00180 336 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 DCTN3O75935 186 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 HLA-DRB1P01911 266 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 KCNJ8Q15842 424 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 KHDC3LQ587J8 217 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 DPPA3Q6W0C5 159 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 MIR17HGQ75NE6 70 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 DEFB128Q7Z7B8 93 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 LRRC25Q8N386 305 aaPredicted RBP0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 TERB2Q8NHR7 220 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 PPP1R2P1Q96PQ5 205 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 TMEM147Q9BVK8 224 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 KLK9Q9UKQ9 250 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 ZNF462Q96JM2 2506 aa0.72□□□□□ -2.29
PRPF4B-207ENST00000490399 CNTRLQ7Z7A1 2325 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 PCLOQ9Y6V0 5065 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 LOC110117498A0A087WWA1 95 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 DPRXA6NFQ7 191 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 FAAHO00519 579 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 OR1I1O60431 355 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 SPCS3P61009 180 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 SNRPD2P62316 118 aaKnown RBP0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 RNASE10Q5GAN6 216 aaKnown RBP0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 OR13C4Q8NGS5 318 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 H1FXQ92522 213 aaKnown RBP0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 MRPS26Q9BYN8 205 aaKnown RBP0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 ULBP3Q9BZM4 244 aa0.71□□□□□ -2.3
PRPF4B-207ENST00000490399 HECW2Q9P2P5 1572 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 HEATR1Q9H583 2144 aaKnown RBP0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 BUB1B-PAK6H3BSN5 160 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 OR2T1O43869 369 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 SSR2P43308 183 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 RPL5P46777 297 aaKnown RBP0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 RPS20P60866 119 aaKnown RBP0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 PDE6HQ13956 83 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 PHF13Q86YI8 300 aaPredicted RBP0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 GUCA1BQ9UMX6 200 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 ASCC3Q8N3C0 2202 aaKnown RBP0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 CASP8AP2Q9UKL3 1982 aa0.7□□□□□ -2.3
PRPF4B-207ENST00000490399 CACNA1AO00555 2505 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 A0A0D9SG52 128 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 PQLC2LA1A4F0 135 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 PSMD12O00232 456 aaPredicted RBP0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 HYPMO75409 117 aa0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 HIST1H1EP10412 219 aaKnown RBP0.69□□□□□ -2.3
PRPF4B-207ENST00000490399 HIST1H1TP22492 207 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms