RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 A0A0G2JRQ6 117 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 TEX13DA0A0J9YY54 714 aaPredicted RBP14.85□□□□□ -0.03
SMC4-222ENST00000490207 FABP12A6NFH5 140 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 SCAF4O95104 1147 aaKnown RBP14.85□□□□□ -0.03
SMC4-222ENST00000490207 IFNA17P01571 189 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 ADMP35318 185 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 HAGHQ16775 308 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 PINX1Q96BK5 328 aaKnown RBP14.85□□□□□ -0.03
SMC4-222ENST00000490207 SOSTQ9BQB4 213 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 SPATA25Q9BR10 227 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 DAZ1Q9NQZ3 744 aaKnown RBP14.85□□□□□ -0.03
SMC4-222ENST00000490207 GPR132Q9UNW8 380 aa14.85□□□□□ -0.03
SMC4-222ENST00000490207 MT-CO2P00403 227 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 HOXA1P49639 335 aaPredicted RBP14.84□□□□□ -0.03
SMC4-222ENST00000490207 MFAP4P55083 255 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 SLC16A13Q7RTY0 426 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 DEFB125Q8N687 156 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 C20orf24Q9BUV8 137 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 SRD5A3Q9H8P0 318 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 SCP2D1Q9UJQ7 156 aa14.84□□□□□ -0.03
SMC4-222ENST00000490207 KMT2CQ8NEZ4 4911 aaKnown RBP14.83□□□□□ -0.04
SMC4-222ENST00000490207 TRAV25A0A0B4J276 109 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 CRYM-AS1A6NIL9 109 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 OR11H12B2RN74 326 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 INS-IGF2F8WCM5 200 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 NUPL2O15504 423 aaKnown RBP14.83□□□□□ -0.04
SMC4-222ENST00000490207 CDS2O95674 445 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 FCGR2BP31994 310 aaPredicted RBP14.83□□□□□ -0.04
SMC4-222ENST00000490207 SNCAP37840 140 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 DHODHQ02127 395 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 RELQ04864 619 aaPredicted RBP14.83□□□□□ -0.04
SMC4-222ENST00000490207 RBPMS2Q6ZRY4 209 aaKnown RBP14.83□□□□□ -0.04
SMC4-222ENST00000490207 FAM219AQ8IW50 185 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 OR52B4Q8NGK2 314 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 LHFPL5Q8TAF8 219 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 GLYATL2Q8WU03 294 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 RBPMSQ93062 196 aaKnown RBP14.83□□□□□ -0.04
SMC4-222ENST00000490207 TXN2Q99757 166 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 ENY2Q9NPA8 101 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 MCUBQ9NWR8 336 aa14.83□□□□□ -0.04
SMC4-222ENST00000490207 IGHV3OR16-8A0A075B7F1 116 aa14.82□□□□□ -0.04
SMC4-222ENST00000490207 CTSGP08311 255 aa14.82□□□□□ -0.04
SMC4-222ENST00000490207 C3orf84H3BNL1 204 aa14.81□□□□□ -0.04
SMC4-222ENST00000490207 ZNF207O43670 478 aaKnown RBP14.81□□□□□ -0.04
SMC4-222ENST00000490207 IGHV3-48P01763 117 aa14.81□□□□□ -0.04
SMC4-222ENST00000490207 ETV6P41212 452 aa14.81□□□□□ -0.04
SMC4-222ENST00000490207 ANKRD55Q3KP44 614 aa14.81□□□□□ -0.04
SMC4-222ENST00000490207 SELENOHQ8IZQ5 122 aaKnown RBP14.81□□□□□ -0.04
SMC4-222ENST00000490207 SCGB3A2Q96PL1 93 aa14.81□□□□□ -0.04
SMC4-222ENST00000490207 RBM38Q9H0Z9 239 aaKnown RBP14.81□□□□□ -0.04
SMC4-222ENST00000490207 C15orf62A8K5M9 175 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 K7EMT4 169 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 GNG7O60262 68 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 RNASE2P10153 161 aaKnown RBP14.8□□□□□ -0.04
SMC4-222ENST00000490207 SUB1P53999 127 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMC4-222ENST00000490207 TMEM268Q5VZI3 342 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 LINC00322Q6ZN03 302 aaPredicted RBP14.8□□□□□ -0.04
SMC4-222ENST00000490207 Q6ZRM9 215 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 MUC7Q8TAX7 377 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 TMEM230Q96A57 120 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 ZNF414Q96IQ9 312 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 CITED4Q96RK1 184 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 V9GYH0 126 aa14.8□□□□□ -0.04
SMC4-222ENST00000490207 RBMY1BA6NDE4 496 aaKnown RBP14.79□□□□□ -0.04
SMC4-222ENST00000490207 RBMY1EA6NEQ0 496 aaKnown RBP14.79□□□□□ -0.04
SMC4-222ENST00000490207 CORTO00230 105 aa14.79□□□□□ -0.04
SMC4-222ENST00000490207 RBMY1DP0C7P1 496 aaKnown RBP14.79□□□□□ -0.04
SMC4-222ENST00000490207 S100A5P33763 92 aa14.79□□□□□ -0.04
SMC4-222ENST00000490207 FAUP35544 74 aaKnown RBP14.79□□□□□ -0.04
SMC4-222ENST00000490207 SPCS3P61009 180 aa14.79□□□□□ -0.04
SMC4-222ENST00000490207 PYDC2Q56P42 97 aa14.79□□□□□ -0.04
SMC4-222ENST00000490207 TRIM63Q969Q1 353 aa14.79□□□□□ -0.04
SMC4-222ENST00000490207 SPAG8Q99932 426 aaPredicted RBP14.79□□□□□ -0.04
SMC4-222ENST00000490207 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.79□□□□□ -0.04
SMC4-222ENST00000490207 CACNG5Q9UF02 275 aa14.79□□□□□ -0.04
SMC4-222ENST00000490207 YIF1AO95070 293 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 KLF9Q13886 244 aaPredicted RBP14.78□□□□□ -0.04
SMC4-222ENST00000490207 AARDQ4LEZ3 155 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 PVRIGQ6DKI7 326 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 LAMTOR1Q6IAA8 161 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 DUSP18Q8NEJ0 188 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 GPR146Q96CH1 333 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 GALNT14Q96FL9 552 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 KCNIP3Q9Y2W7 256 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 TMEM56-RWDD3S4R434 201 aa14.78□□□□□ -0.04
SMC4-222ENST00000490207 TSPAN4O14817 238 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 NPBWR1P48145 328 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 AP3S2P59780 193 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 TMEM187Q14656 261 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 ZNF79Q15937 498 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 TOMM5Q8N4H5 51 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 OR52E5Q8NH55 327 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 IL22RA2Q969J5 263 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 OR10C1Q96KK4 312 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 RETNQ9HD89 108 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 PRR13Q9NZ81 148 aa14.77□□□□□ -0.05
SMC4-222ENST00000490207 IGHV7-4-1A0A0J9YVY3 117 aa14.76□□□□□ -0.05
SMC4-222ENST00000490207 ZNF701M0R085 212 aaPredicted RBP14.76□□□□□ -0.05
SMC4-222ENST00000490207 AKR1C4P17516 323 aa14.76□□□□□ -0.05
SMC4-222ENST00000490207 OPRK1P41145 380 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms