RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SYCNQ0VAF6 134 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 IL15RAQ13261 267 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 SMCO1Q147U7 214 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 TSNQ15631 228 aaKnown RBP2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 CST6Q15828 149 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 C22orf39Q6P5X5 142 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 CAMK2N1Q7Z7J9 78 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 LRRC18Q8N456 261 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 NATD1Q8N6N6 113 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 MCFD2Q8NI22 146 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 SCGB1C1Q8TD33 95 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 BORCS5Q969J3 196 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 CAMK2N2Q96S95 79 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 TBL1XR1Q9BZK7 514 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 OR51I2Q9H344 312 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 HES4Q9HCC6 221 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 BIN3Q9NQY0 253 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 FBXL12Q9NXK8 326 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 CYSLTR1Q9Y271 337 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 PLXNA2O75051 1894 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 USP24Q9UPU5 2620 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 SHROOM3Q8TF72 1996 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 ACACBO00763 2458 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 ANKRD11Q6UB99 2663 aaPredicted RBP2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 KALRNO60229 2985 aa2.11□□□□□ -2.07
DEPDC1-204ENST00000489862 TRPM6Q9BX84 2022 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 KNTC1P50748 2209 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 GOLGA4Q13439 2230 aaKnown RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ZFYVE26Q68DK2 2539 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 CFAP46Q8IYW2 2715 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 IGSF23A1L1A6 192 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 TRAPPC13A5PLN9 417 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 CD300LBA8K4G0 201 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 A8MUN3 132 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 PHOX2AO14813 284 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 HMGB3O15347 200 aaKnown RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 CST8O60676 142 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 SOD1P00441 154 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 LTAP01374 205 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 APCSP02743 223 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 HLA-DQB2P05538 268 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 GABRR1P24046 479 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 CD34P28906 385 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 S100GP29377 79 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 RPS10P46783 165 aaKnown RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 PSMD8P48556 350 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 TPI1P60174 286 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 DYNLT1P63172 113 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 TNFAIP6P98066 277 aaPredicted RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 BSPH1Q075Z2 132 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 BAMBIQ13145 260 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 IAH1Q2TAA2 248 aaPredicted RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 C15orf32Q32M92 178 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 RNF212Q495C1 297 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 HIGD2BQ4VC39 106 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 TEX30Q5JUR7 227 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF678Q5SXM1 525 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 GOLT1AQ6ZVE7 132 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 STX19Q8N4C7 294 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF283Q8N7M2 679 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ZDHHC22Q8N966 263 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 OR5H2Q8NGV7 314 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 OR13C6PQ8NH95 151 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 SGMS2Q8NHU3 365 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 NAT14Q8WUY8 206 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 C11orf40Q8WZ69 217 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 BORCS7Q96B45 105 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ZC2HC1AQ96GY0 325 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 SLC35G5Q96KT7 338 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 OR2A5Q96R48 311 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 OR52E6Q96RD3 313 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 C6orf62Q9GZU0 229 aaPredicted RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 PARP12Q9H0J9 701 aaKnown RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 TCEAL2Q9H3H9 227 aaPredicted RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF586Q9NXT0 402 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 HEY1Q9Y5J3 304 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 KMT2BQ9UMN6 2715 aaPredicted RBP2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 ANKRD36A6QL64 1941 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 BOD1L1Q8NFC6 3051 aa2.1□□□□□ -2.07
DEPDC1-204ENST00000489862 IGKV1D-43A0A0B4J1Z2 117 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 IGHV3-64DA0A0J9YX35 117 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 CXorf51AA0A1B0GTR3 108 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 LOC285095A0A1B0GVY8 99 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 MAP1LC3B2A6NCE7 125 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 A6NDX4 124 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 KNCNA6PVL3 124 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 TSTD3H0UI37 97 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 H3BSA7 217 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 K7EPK0 472 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 LST1O00453 97 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 NDUFA2O43678 99 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF682O95780 498 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 CSN2P05814 226 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 OR56A5P0C7T3 313 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 PIRTP0C851 137 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 NELFEP18615 380 aaKnown RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 OR10J1P30954 320 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 UBE2AP49459 152 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 ESRRGP62508 458 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms