RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-212ENST00000489728 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
CPSF7-212ENST00000489728 TXN2Q99757 166 aa8.51□□□□□ -1.05
CPSF7-212ENST00000489728 NUDT15Q9NV35 164 aa8.51□□□□□ -1.05
CPSF7-212ENST00000489728 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
CPSF7-212ENST00000489728 NOTCH1P46531 2555 aa8.51□□□□□ -1.05
CPSF7-212ENST00000489728 MFSD2BA6NFX1 497 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 K7EIM0 57 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 PITX3O75364 302 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
CPSF7-212ENST00000489728 MFAP2P55001 183 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 ACSM6Q6P461 480 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 SPSB3Q6PJ21 355 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 MITD1Q8WV92 249 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 BSCL2Q96G97 398 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-212ENST00000489728 ELOVL1Q9BW60 279 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 HIPK2Q9H2X6 1198 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 SIGLEC8Q9NYZ4 499 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 PRR13Q9NZ81 148 aa8.5□□□□□ -1.05
CPSF7-212ENST00000489728 NOTCH3Q9UM47 2321 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 CEBPZOSA8MTT3 80 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 I3L2K1 104 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 LGALS9O00182 355 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 IFNA21P01568 189 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 TRBV12-3P01733 135 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 RNASE2P10153 161 aaKnown RBP8.49□□□□□ -1.05
CPSF7-212ENST00000489728 ARL3P36405 182 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 GPHB5Q86YW7 130 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 DUSP18Q8NEJ0 188 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 OR9G4Q8NGQ1 327 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 OR1S1Q8NH92 325 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 HEYLQ9NQ87 328 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-212ENST00000489728 C21orf62Q9NYP8 219 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
CPSF7-212ENST00000489728 A8MWP6 167 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 TGOLN2O43493 480 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 MED6O75586 246 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 H2AFB2P0C5Z0 115 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 FAM106AQ4KMX7 169 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 C2orf83Q53S99 150 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 SPINK9Q5DT21 86 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 GGNBP1Q5YKI7 109 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 CLEC19AQ6UXS0 136 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 SLC24A4Q8NFF2 622 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 RNASEH2CQ8TDP1 164 aaKnown RBP8.48□□□□□ -1.05
CPSF7-212ENST00000489728 DTD1Q8TEA8 209 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 SCARB1Q8WTV0 552 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-212ENST00000489728 OR4C12Q96R67 309 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 U3KQ87 197 aa8.48□□□□□ -1.05
CPSF7-212ENST00000489728 TRAV6A0A075B6T7 132 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 RPS10-NUDT3A0A1W2PQS6 291 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 PPP5D1E7EU14 171 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 PRAF2O60831 178 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 SAP30O75446 220 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 MT-CO2P00403 227 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 IL5P05113 134 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 CLEC3BP05452 202 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 HOXB5P09067 269 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 NPY1RP25929 384 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 GPR183P32249 361 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 MFAP4P55083 255 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 IFITM3Q01628 133 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 DCTN2Q13561 401 aaKnown RBP8.47□□□□□ -1.05
CPSF7-212ENST00000489728 PLET1Q6UQ28 207 aa8.47□□□□□ -1.05
CPSF7-212ENST00000489728 ZNF431Q8TF32 576 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-212ENST00000489728 F8W735 103 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-212ENST00000489728 NUPL2O15504 423 aaKnown RBP8.46□□□□□ -1.06
CPSF7-212ENST00000489728 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 SLC25A4P12235 298 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 NPBWR1P48145 328 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 ELLP55199 621 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-212ENST00000489728 DEFA6Q01524 100 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-212ENST00000489728 ETFRF1Q6IPR1 90 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 OR2K2Q8NGT1 345 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 MARC2Q969Z3 335 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 ZNF436Q9C0F3 470 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-212ENST00000489728 RBKSQ9H477 322 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 GPN1Q9HCN4 374 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-212ENST00000489728 PALMDQ9NP74 551 aa8.46□□□□□ -1.06
CPSF7-212ENST00000489728 OR2T8A6NH00 312 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 NDUFA4O00483 81 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 SYNGR2O43760 224 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 GNG7O60262 68 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 ADAP1O75689 374 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 OR2C1O95371 312 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 OPRK1P41145 380 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
CPSF7-212ENST00000489728 ID3Q02535 119 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 Q56UQ5 140 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 IL34Q6ZMJ4 242 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 NRARPQ7Z6K4 114 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 OR4D5Q8NGN0 318 aa8.45□□□□□ -1.06
CPSF7-212ENST00000489728 OR4X1Q8NH49 305 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms