RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 OR11H12B2RN74 326 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
ABCF3-217ENST00000489719 ST8SIA3O43173 380 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 CDS2O95674 445 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 MT-CO2P00403 227 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 OR5AC1P0C628 307 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 P0C879 139 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 ETV6P41212 452 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 HAGHQ16775 308 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 SPINK9Q5DT21 86 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 BTNL8Q6UX41 500 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 TMEM61Q8N0U2 210 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 ZNF114Q8NC26 417 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 TMEM190Q8WZ59 177 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 PINX1Q96BK5 328 aaKnown RBP13.43□□□□□ -0.26
ABCF3-217ENST00000489719 TMEM222Q9H0R3 208 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 C5orf66Q9H5L9 145 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 MCUBQ9NWR8 336 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 KCNIP3Q9Y2W7 256 aa13.43□□□□□ -0.26
ABCF3-217ENST00000489719 TRAV25A0A0B4J276 109 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 I3L2K1 104 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
ABCF3-217ENST00000489719 CTSGP08311 255 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 S100A5P33763 92 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 RELQ04864 619 aaPredicted RBP13.42□□□□□ -0.26
ABCF3-217ENST00000489719 FAM219AQ8IW50 185 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 DEFB125Q8N687 156 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 OR52B4Q8NGK2 314 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 GLYATL2Q8WU03 294 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 SPATA25Q9BR10 227 aa13.42□□□□□ -0.26
ABCF3-217ENST00000489719 DAZ1Q9NQZ3 744 aaKnown RBP13.42□□□□□ -0.26
ABCF3-217ENST00000489719 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.42□□□□□ -0.26
ABCF3-217ENST00000489719 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
ABCF3-217ENST00000489719 K7EMT4 169 aa13.41□□□□□ -0.26
ABCF3-217ENST00000489719 YIF1AO95070 293 aa13.41□□□□□ -0.26
ABCF3-217ENST00000489719 ADMP35318 185 aa13.41□□□□□ -0.26
ABCF3-217ENST00000489719 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
ABCF3-217ENST00000489719 LAMTOR1Q6IAA8 161 aa13.41□□□□□ -0.26
ABCF3-217ENST00000489719 DUSP18Q8NEJ0 188 aa13.41□□□□□ -0.26
ABCF3-217ENST00000489719 RBPMSQ93062 196 aaKnown RBP13.41□□□□□ -0.26
ABCF3-217ENST00000489719 CRYM-AS1A6NIL9 109 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 INS-IGF2F8WCM5 200 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 C3orf84H3BNL1 204 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 GNG7O60262 68 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 IGHV3-48P01763 117 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 FCGR2BP31994 310 aaPredicted RBP13.4□□□□□ -0.26
ABCF3-217ENST00000489719 NPBWR1P48145 328 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
ABCF3-217ENST00000489719 SELENOHQ8IZQ5 122 aaKnown RBP13.4□□□□□ -0.26
ABCF3-217ENST00000489719 SRD5A3Q9H8P0 318 aa13.4□□□□□ -0.26
ABCF3-217ENST00000489719 IGHV3OR16-8A0A075B7F1 116 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
ABCF3-217ENST00000489719 FAUP35544 74 aaKnown RBP13.39□□□□□ -0.27
ABCF3-217ENST00000489719 AP3S2P59780 193 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 SPCS3P61009 180 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 TMEM268Q5VZI3 342 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 Q6ZRM9 215 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 TENM3Q9P273 2699 aa13.39□□□□□ -0.27
ABCF3-217ENST00000489719 A0A0G2JRQ6 117 aa13.38□□□□□ -0.27
ABCF3-217ENST00000489719 CORTO00230 105 aa13.38□□□□□ -0.27
ABCF3-217ENST00000489719 OR52E5Q8NH55 327 aa13.38□□□□□ -0.27
ABCF3-217ENST00000489719 GPR146Q96CH1 333 aa13.38□□□□□ -0.27
ABCF3-217ENST00000489719 TMEM56-RWDD3S4R434 201 aa13.38□□□□□ -0.27
ABCF3-217ENST00000489719 RBMY1BA6NDE4 496 aaKnown RBP13.37□□□□□ -0.27
ABCF3-217ENST00000489719 RBMY1EA6NEQ0 496 aaKnown RBP13.37□□□□□ -0.27
ABCF3-217ENST00000489719 RBMY1DP0C7P1 496 aaKnown RBP13.37□□□□□ -0.27
ABCF3-217ENST00000489719 AKR1C4P17516 323 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 LINC00322Q6ZN03 302 aaPredicted RBP13.37□□□□□ -0.27
ABCF3-217ENST00000489719 TOMM5Q8N4H5 51 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 LHFPL5Q8TAF8 219 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 MUC7Q8TAX7 377 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 SPAG8Q99932 426 aaPredicted RBP13.37□□□□□ -0.27
ABCF3-217ENST00000489719 WFDC10AQ9H1F0 79 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 HEYLQ9NQ87 328 aaPredicted RBP13.37□□□□□ -0.27
ABCF3-217ENST00000489719 CACNG5Q9UF02 275 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 CACFD1Q9UGQ2 172 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
ABCF3-217ENST00000489719 TRAV14DV4A0A0A6YYC5 116 aa13.36□□□□□ -0.27
ABCF3-217ENST00000489719 TSPAN4O14817 238 aa13.36□□□□□ -0.27
ABCF3-217ENST00000489719 RNASE2P10153 161 aaKnown RBP13.36□□□□□ -0.27
ABCF3-217ENST00000489719 ANXA3P12429 323 aa13.36□□□□□ -0.27
ABCF3-217ENST00000489719 IL22RA2Q969J5 263 aa13.36□□□□□ -0.27
ABCF3-217ENST00000489719 GALNT14Q96FL9 552 aa13.36□□□□□ -0.27
ABCF3-217ENST00000489719 HUWE1Q7Z6Z7 4374 aaKnown RBP13.35□□□□□ -0.27
ABCF3-217ENST00000489719 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 ZNF701M0R085 212 aaPredicted RBP13.35□□□□□ -0.27
ABCF3-217ENST00000489719 TMEM50AO95807 157 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 HTR2BP41595 481 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 TMEM187Q14656 261 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 PVRIGQ6DKI7 326 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 RHPN1-AS1Q9BWJ2 59 aa13.35□□□□□ -0.27
ABCF3-217ENST00000489719 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 SCGB2A1O75556 95 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 SULT1A3P0DMM9 295 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 SULT1A4P0DMN0 295 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 LYL1P12980 280 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 OPRK1P41145 380 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms