RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 DEFA4P12838 97 aa11.15□□□□□ -0.62
CLDN11-209ENST00000489485 RPL23AP62750 156 aaKnown RBP11.15□□□□□ -0.62
CLDN11-209ENST00000489485 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
CLDN11-209ENST00000489485 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
CLDN11-209ENST00000489485 ZNF546Q86UE3 836 aa11.15□□□□□ -0.62
CLDN11-209ENST00000489485 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
CLDN11-209ENST00000489485 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
CLDN11-209ENST00000489485 MED9Q9NWA0 146 aa11.15□□□□□ -0.62
CLDN11-209ENST00000489485 TMA7Q9Y2S6 64 aaKnown RBP11.15□□□□□ -0.62
CLDN11-209ENST00000489485 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 ARPC5O15511 151 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 PF4V1P10720 104 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 SLC25A4P12235 298 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 LYL1P12980 280 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 S100A11P31949 105 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 CFHR3Q02985 330 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 C19orf54Q5BKX5 351 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 TTC9CQ8N5M4 171 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 C11orf44Q8N8P7 122 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 SLC24A4Q8NFF2 622 aa11.15□□□□□ -0.63
CLDN11-209ENST00000489485 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.63
CLDN11-209ENST00000489485 NPIPB5A8MRT5 1133 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 INS-IGF2F8WCM5 200 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 IGHG4P01861 327 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 PRH1P02810 166 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 TAS2R30P59541 319 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 OR4X2Q8NGF9 303 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 FAM110DQ8TAY7 271 aaPredicted RBP11.14□□□□□ -0.63
CLDN11-209ENST00000489485 MS4A10Q96PG2 267 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 P2RX4Q99571 388 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 STRAPQ9Y3F4 350 aaKnown RBP11.14□□□□□ -0.63
CLDN11-209ENST00000489485 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
CLDN11-209ENST00000489485 FBXO24O75426 580 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 CTRB1P17538 263 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 CXCL2P19875 107 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 P2RY1P47900 373 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 TMEM65Q6PI78 240 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 OR4C12Q96R67 309 aa11.13□□□□□ -0.63
CLDN11-209ENST00000489485 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 CST7O76096 145 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 LY86O95711 162 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 IGLV1-40P01703 118 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 CRYGCP07315 174 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 METTL15P1P0C7V9 234 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 RNASE2P10153 161 aaKnown RBP11.12□□□□□ -0.63
CLDN11-209ENST00000489485 NPY1RP25929 384 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 RPL12P30050 165 aaKnown RBP11.12□□□□□ -0.63
CLDN11-209ENST00000489485 RPP30P78346 268 aaKnown RBP11.12□□□□□ -0.63
CLDN11-209ENST00000489485 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 INO80EQ8NBZ0 244 aaPredicted RBP11.12□□□□□ -0.63
CLDN11-209ENST00000489485 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 TNFSF18Q9UNG2 199 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 IGSF23A1L1A6 192 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 IFNA4P05014 189 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 PSMB8P28062 276 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLDN11-209ENST00000489485 NHLH2Q02577 135 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 TMUB2Q71RG4 321 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 COMMD1Q8N668 190 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 TMEM217Q8N7C4 229 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 WFDC12Q8WWY7 111 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 ZC4H2Q9NQZ6 224 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 PFDN2Q9UHV9 154 aa11.12□□□□□ -0.63
CLDN11-209ENST00000489485 F11RQ9Y624 299 aaKnown RBP11.12□□□□□ -0.63
CLDN11-209ENST00000489485 CFDP00746 253 aaPredicted RBP11.11□□□□□ -0.63
CLDN11-209ENST00000489485 TRGV3P03979 118 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 RPLP1P05386 114 aaKnown RBP11.11□□□□□ -0.63
CLDN11-209ENST00000489485 ELANEP08246 267 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 OR8U8P0C7N1 319 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 NUP62P37198 522 aaPredicted RBP11.11□□□□□ -0.63
CLDN11-209ENST00000489485 RAB9AP51151 201 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 MFAP2P55001 183 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 TPPP2P59282 170 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 FOXE3Q13461 319 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 C2orf83Q53S99 150 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 SLC25A24Q6NUK1 477 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 ZNF114Q8NC26 417 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 WIPF2Q8TF74 440 aaPredicted RBP11.11□□□□□ -0.63
CLDN11-209ENST00000489485 ZMAT5Q9UDW3 170 aaKnown RBP11.11□□□□□ -0.63
CLDN11-209ENST00000489485 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
CLDN11-209ENST00000489485 RNF222A6NCQ9 220 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 CYB5BO43169 146 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 CD28P10747 220 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 RAB11AP62491 216 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 DEFA5Q01523 94 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 EWSR1Q01844 656 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLDN11-209ENST00000489485 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 PINX1Q96BK5 328 aaKnown RBP11.1□□□□□ -0.63
CLDN11-209ENST00000489485 MDFIQ99750 246 aa11.1□□□□□ -0.63
CLDN11-209ENST00000489485 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms