RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 M6PRP20645 277 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 MAPK3P27361 379 aaPredicted RBP7.86□□□□□ -1.15
HDAC6-233ENST00000489352 NPBWR1P48145 328 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 FCN2Q15485 313 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 ACSM3Q53FZ2 586 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 C1orf158Q8N1D5 194 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 OR52I1Q8NGK6 324 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 MAFIPQ8WZ33 124 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 TMEM56Q96MV1 263 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 DERL3Q96Q80 235 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 OR2W1Q9Y3N9 320 aa7.86□□□□□ -1.15
HDAC6-233ENST00000489352 ERICH4A6NGS2 130 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 TMEM14DPA8MWL7 114 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 FAM90A26D6RGX4 464 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 MT-CO2P00403 227 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 LIMS3P0CW19 117 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 LIMS4P0CW20 117 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 TALDO1P37837 337 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 NKX2-1P43699 371 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-233ENST00000489352 TMEM50BP56557 158 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 TAS2R31P59538 309 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 RPS11P62280 158 aaKnown RBP eCLIP7.85□□□□□ -1.15
HDAC6-233ENST00000489352 FLOT2Q14254 428 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 SPAG16Q8N0X2 631 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 FAM89BQ8N5H3 189 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 OR56B1Q8NGI3 324 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 OR1P1Q8NH06 330 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 TMEM230Q96A57 120 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 GABARAPL1Q9H0R8 117 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 SLC35B3Q9H1N7 401 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 SEPSECSQ9HD40 501 aaKnown RBP7.85□□□□□ -1.15
HDAC6-233ENST00000489352 TMEM140Q9NV12 185 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 ORC6Q9Y5N6 252 aa7.85□□□□□ -1.15
HDAC6-233ENST00000489352 ZNF705GA8MUZ8 300 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-233ENST00000489352 I3L2K1 104 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 EBAG9O00559 213 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 PSCAO43653 123 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 FGF2P09038 288 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 CRYBB3P26998 211 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 GYS2P54840 703 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 BRWD1-AS2P59051 145 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 PSG9Q00887 426 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 TPRA1Q86W33 373 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 PQLC1Q8N2U9 271 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 ZFP41Q8N8Y5 198 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 ZNF709Q8N972 641 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 PGLYRP3Q96LB9 341 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 FAM107BQ9H098 131 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 DCSTAMPQ9H295 470 aa7.84□□□□□ -1.15
HDAC6-233ENST00000489352 A0A1B0GU03 582 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 PNMA8CA0A1B0GUJ8 204 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 SCGB2A1O75556 95 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 HPRT1P00492 218 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 HLA-DQB1P01920 261 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 ETV1P50549 477 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 ERVK-16P61578 105 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 GNGT1P63211 74 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 QRFPP83859 136 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 C1orf100Q5SVJ3 147 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 GDF5OSQ5U4N7 250 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 CADM3Q8N126 398 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 OR13F1Q8NGS4 319 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 OR10J6PQ8NGY7 276 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 LINC00052Q96N35 136 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 NDUFA4L2Q9NRX3 87 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 ARL2BPQ9Y2Y0 163 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 OR51B2Q9Y5P1 312 aa7.83□□□□□ -1.16
HDAC6-233ENST00000489352 TNFSF12O43508 249 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 SNAPC5O75971 98 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 IGLV2-14P01704 120 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 NFYAP23511 347 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-233ENST00000489352 PPP5CP53041 499 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 PLAC9Q5JTB6 97 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 EBLN2Q6P2I7 272 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 FOXI2Q6ZQN5 318 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 ABHD1Q96SE0 405 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 GPHA2Q96T91 129 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 SAV1Q9H4B6 383 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-233ENST00000489352 SCPEP1Q9HB40 452 aa7.82□□□□□ -1.16
HDAC6-233ENST00000489352 ADAP1O75689 374 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 CTXN2P0C2S0 81 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 MYL12AP19105 171 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 B2MP61769 119 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 P2RY14Q15391 338 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 COQ8AQ8NI60 647 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 RAB3CQ96E17 227 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 CLUHP3Q96NS8 147 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 PLGRKTQ9HBL7 147 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 MSRB1Q9NZV6 116 aa7.81□□□□□ -1.16
HDAC6-233ENST00000489352 A0A075B6Q4 140 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 TCRBV3S1A0A5B6 114 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 FOXI3A8MTJ6 420 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-233ENST00000489352 H3BNG1 76 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 SULT1C2O00338 296 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 RBFOX2O43251 390 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC6-233ENST00000489352 TMEM50AO95807 157 aa7.8□□□□□ -1.16
HDAC6-233ENST00000489352 LALBAP00709 142 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms