RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TM4SF20Q53R12 229 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 BTNL8Q6UX41 500 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 UNQ9165/PRO28630Q6UXU0 137 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 TMEM61Q8N0U2 210 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 ZNF114Q8NC26 417 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 TERB2Q8NHR7 220 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 SCGB3A2Q96PL1 93 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 DAZ1Q9NQZ3 744 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 MLXQ9UH92 298 aa10.4□□□□□ -0.74
SPTLC1-207ENST00000488921 DBX1A6NMT0 343 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 OR11H12B2RN74 326 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 NDUFA4O00483 81 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 C8orf88P0DMB2 117 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 MFAP2P55001 183 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 HSPE1P61604 102 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 ERHP84090 104 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 Q56UQ5 140 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 RBPMS2Q6ZRY4 209 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 OR2C3Q8N628 320 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 UBAC2Q8NBM4 344 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 OR4D10Q8NGI6 311 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 OR51S1Q8NGJ8 323 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 OR52B4Q8NGK2 314 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 SCARB1Q8WTV0 552 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
SPTLC1-207ENST00000488921 IGHV3-35A0A0C4DH35 117 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 K7EIM0 57 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 LYRM1O43325 122 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 LYL1P12980 280 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 PI3P19957 117 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 RELQ04864 619 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 DEFB125Q8N687 156 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 SLC35G3Q8N808 338 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 MISP3Q96FF7 219 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 C14orf166Q9Y224 244 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-207ENST00000488921 IGHV3-21A0A0B4J1V1 117 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 SCAF4O95104 1147 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 CTSDP07339 412 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 FCGR2BP31994 310 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 MFAP4P55083 255 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 ASAH1Q13510 395 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 CASC10Q5T4H9 136 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 LAMTOR1Q6IAA8 161 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 LINC00322Q6ZN03 302 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 OR13C8Q8NGS7 320 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 TXN2Q99757 166 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 SPAG8Q99932 426 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 SLC25A21Q9BQT8 299 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 C5orf66Q9H5L9 145 aa10.37□□□□□ -0.75
SPTLC1-207ENST00000488921 FAM240BA0A1B0GVZ2 78 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 C15orf62A8K5M9 175 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 K7EMT4 169 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 PLA2G10O15496 165 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 IFNA17P01571 189 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 IGKV1-5P01602 117 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 UCP1P25874 307 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 SURF2Q15527 256 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 MARCH1Q8TCQ1 289 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 CHRDL1Q9BU40 450 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 C20orf24Q9BUV8 137 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 EDA2RQ9HAV5 297 aa10.36□□□□□ -0.75
SPTLC1-207ENST00000488921 RBMY1BA6NDE4 496 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 RBMY1EA6NEQ0 496 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 INS-IGF2F8WCM5 200 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 I3L2K1 104 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 CORTO00230 105 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 MT-CO2P00403 227 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 RBMY1DP0C7P1 496 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 P0C879 139 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 ADMP35318 185 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 SNCAP37840 140 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 SUB1P53999 127 aaKnown RBP eCLIP10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 IFITM3Q01628 133 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 RBMS2Q15434 407 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 PINX1Q96BK5 328 aaKnown RBP10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 HIPK2Q9H2X6 1198 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 SELENOKQ9Y6D0 94 aa10.35□□□□□ -0.75
SPTLC1-207ENST00000488921 TSPAN4O14817 238 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 ST8SIA3O43173 380 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 GNG7O60262 68 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 CTSGP08311 255 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 HOXA1P49639 335 aaPredicted RBP10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 CCR6P51684 374 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 SP6Q3SY56 376 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 TMEM222Q9H0R3 208 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 NAA60Q9H7X0 242 aa10.34□□□□□ -0.75
SPTLC1-207ENST00000488921 ENY2Q9NPA8 101 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms