RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ST8SIA3O43173 380 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 SNCAP37840 140 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 HAGHQ16775 308 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 ANKRD55Q3KP44 614 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 SLC16A13Q7RTY0 426 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 SLC35G3Q8N808 338 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 UBAC2Q8NBM4 344 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 OR51S1Q8NGJ8 323 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 RNASE11Q8TAA1 199 aaKnown RBP13.15□□□□□ -0.3
ATG3-205ENST00000488910 GLYATL2Q8WU03 294 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 CHRDL1Q9BU40 450 aa13.15□□□□□ -0.3
ATG3-205ENST00000488910 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.3
ATG3-205ENST00000488910 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 CRYM-AS1A6NIL9 109 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 K7EMT4 169 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
ATG3-205ENST00000488910 MT-CO2P00403 227 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 CTSGP08311 255 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 CD7P09564 240 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 OR5AC1P0C628 307 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 ADMP35318 185 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 SUB1P53999 127 aaKnown RBP eCLIP13.14□□□□□ -0.31
ATG3-205ENST00000488910 RELQ04864 619 aaPredicted RBP13.14□□□□□ -0.31
ATG3-205ENST00000488910 BTNL8Q6UX41 500 aa13.14□□□□□ -0.31
ATG3-205ENST00000488910 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
ATG3-205ENST00000488910 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
ATG3-205ENST00000488910 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
ATG3-205ENST00000488910 OR11H12B2RN74 326 aa13.13□□□□□ -0.31
ATG3-205ENST00000488910 C3orf84H3BNL1 204 aa13.13□□□□□ -0.31
ATG3-205ENST00000488910 LINC00322Q6ZN03 302 aaPredicted RBP13.13□□□□□ -0.31
ATG3-205ENST00000488910 SPATA25Q9BR10 227 aa13.13□□□□□ -0.31
ATG3-205ENST00000488910 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
ATG3-205ENST00000488910 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
ATG3-205ENST00000488910 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
ATG3-205ENST00000488910 C15orf62A8K5M9 175 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 CORTO00230 105 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 ETV6P41212 452 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 SPCS3P61009 180 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 AARDQ4LEZ3 155 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 SPINK9Q5DT21 86 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 PVRIGQ6DKI7 326 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
ATG3-205ENST00000488910 DEFB125Q8N687 156 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 OR52B4Q8NGK2 314 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 OR52E5Q8NH55 327 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 C20orf24Q9BUV8 137 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 CACFD1Q9UGQ2 172 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
ATG3-205ENST00000488910 A0A0G2JRQ6 117 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 ZNF701M0R085 212 aaPredicted RBP13.11□□□□□ -0.31
ATG3-205ENST00000488910 SCAF4O95104 1147 aaKnown RBP13.11□□□□□ -0.31
ATG3-205ENST00000488910 S100A5P33763 92 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
ATG3-205ENST00000488910 NPBWR1P48145 328 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 HOXA1P49639 335 aaPredicted RBP13.11□□□□□ -0.31
ATG3-205ENST00000488910 AP3S2P59780 193 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 LAMTOR1Q6IAA8 161 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 Q6ZRM9 215 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 LHFPL5Q8TAF8 219 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
ATG3-205ENST00000488910 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 SELENOKQ9Y6D0 94 aa13.11□□□□□ -0.31
ATG3-205ENST00000488910 GNG7O60262 68 aa13.1□□□□□ -0.31
ATG3-205ENST00000488910 PYDC2Q56P42 97 aa13.1□□□□□ -0.31
ATG3-205ENST00000488910 TMEM268Q5VZI3 342 aa13.1□□□□□ -0.31
ATG3-205ENST00000488910 IL22RA2Q969J5 263 aa13.1□□□□□ -0.31
ATG3-205ENST00000488910 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
ATG3-205ENST00000488910 RBM38Q9H0Z9 239 aaKnown RBP13.1□□□□□ -0.31
ATG3-205ENST00000488910 SRD5A3Q9H8P0 318 aa13.1□□□□□ -0.31
ATG3-205ENST00000488910 KMT2CQ8NEZ4 4911 aaKnown RBP13.1□□□□□ -0.31
ATG3-205ENST00000488910 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
ATG3-205ENST00000488910 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
ATG3-205ENST00000488910 TSPAN4O14817 238 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 IGHV3-48P01763 117 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
ATG3-205ENST00000488910 RNASE2P10153 161 aaKnown RBP13.09□□□□□ -0.31
ATG3-205ENST00000488910 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 MUC7Q8TAX7 377 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 GPR146Q96CH1 333 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
ATG3-205ENST00000488910 YIF1AO95070 293 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 KLF9Q13886 244 aaPredicted RBP13.08□□□□□ -0.32
ATG3-205ENST00000488910 TMEM187Q14656 261 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 BSXQ3C1V8 233 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 CCDC190Q86UF4 302 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 TMEM230Q96A57 120 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 WFDC10AQ9H1F0 79 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 CACNG5Q9UF02 275 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 V9GYH0 126 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 NBEAL2Q6ZNJ1 2754 aa13.08□□□□□ -0.32
ATG3-205ENST00000488910 IGHV3OR16-8A0A075B7F1 116 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 PIGBOS1A0A0B4J2F0 54 aa13.07□□□□□ -0.32
ATG3-205ENST00000488910 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
ATG3-205ENST00000488910 AKR1C4P17516 323 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms