RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 S4R3C0 116 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 U3KQ87 197 aa9.61□□□□□ -0.87
TRAIP-209ENST00000488860 A0A1W2PRX2 142 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 TCRBV4S1A1TA0A5B7 111 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 E5RGE8 158 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 H0YIZ8 118 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 TSC22D2O75157 780 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 NDUFB8O95169 186 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 LY86O95711 162 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 IGHV3-23P01764 117 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 METTL15P1P0C7V9 234 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 OPRK1P41145 380 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 RAB9AP51151 201 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 PAX9P55771 341 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 FGL1Q08830 312 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 BSXQ3C1V8 233 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 PRSS54Q6PEW0 395 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 NOXA1Q86UR1 476 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 WIPF2Q8TF74 440 aaPredicted RBP9.6□□□□□ -0.87
TRAIP-209ENST00000488860 TMEM170AQ8WVE7 144 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 FANCD2OSQ96PS1 177 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 THYN1Q9P016 225 aa9.6□□□□□ -0.87
TRAIP-209ENST00000488860 FXYD6-FXYD2A0A087WZ82 144 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 FAM24AA6NFZ4 105 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 CORTO00230 105 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 IGHV3-11P01762 117 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 IGHV3-48P01763 117 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 TAS2R30P59541 319 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 KRTAP10-3P60369 221 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 EXOSC2Q13868 293 aaKnown RBP9.59□□□□□ -0.87
TRAIP-209ENST00000488860 C15orf32Q32M92 178 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 Q5BKY6 102 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 TCTEX1D4Q5JR98 221 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 OR8G2PQ6IF36 304 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 C12orf54Q6X4T0 127 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 ETV3LQ6ZN32 361 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 NECAP1Q8NC96 275 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 ZC4H2Q9NQZ6 224 aa9.59□□□□□ -0.87
TRAIP-209ENST00000488860 LYRM2Q9NU23 88 aaPredicted RBP9.59□□□□□ -0.87
TRAIP-209ENST00000488860 FBN1P35555 2871 aaKnown RBP9.58□□□□□ -0.88
TRAIP-209ENST00000488860 TRBV9A0A0B4J1U6 114 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 IGSF23A1L1A6 192 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 NUDT19A8MXV4 375 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 MT-CO2P00403 227 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 P2RY1P47900 373 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 ATP5G2Q06055 141 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 UBAC2Q8NBM4 344 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 KLHL30-AS1Q8NEE0 82 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 RNASEH2CQ8TDP1 164 aaKnown RBP9.58□□□□□ -0.88
TRAIP-209ENST00000488860 EEF1AKMT3Q96AZ1 226 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 ST6GAL2Q96JF0 529 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 CITED2Q99967 270 aaPredicted RBP9.58□□□□□ -0.88
TRAIP-209ENST00000488860 RNF126Q9BV68 326 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
TRAIP-209ENST00000488860 A0A0G2JLM5 398 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 RPS10-NUDT3A0A1W2PQS6 291 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 G3V3Q6 166 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 K7EIM0 57 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 CST7O76096 145 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 NSUN5P1Q3KNT7 163 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 ACSM6Q6P461 480 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 TMEM14EPQ6UXP3 125 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 C18orf65Q6ZTR6 163 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 STX12Q86Y82 276 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 ZNF491Q8N8L2 437 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 CXorf58Q96LI9 332 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 TSSC4Q9Y5U2 329 aaPredicted RBP9.57□□□□□ -0.88
TRAIP-209ENST00000488860 ATRQ13535 2644 aa9.57□□□□□ -0.88
TRAIP-209ENST00000488860 SMCO3A2RU48 225 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 ANKRD34BA5PLL1 514 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 I3L2K1 104 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 BRI3O95415 125 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 LYL1P12980 280 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 NUP62P37198 522 aaPredicted RBP9.56□□□□□ -0.88
TRAIP-209ENST00000488860 ATP5IP56385 69 aaPredicted RBP9.56□□□□□ -0.88
TRAIP-209ENST00000488860 EWSR1Q01844 656 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAIP-209ENST00000488860 CD300CQ08708 224 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 Q56UQ5 140 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 PVRIGQ6DKI7 326 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 ACOT7LQ6ZUV0 252 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 LILRB2Q8N423 598 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 TMEM252Q8N6L7 170 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 TMEM217Q8N7C4 229 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 C3orf56Q8N813 242 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 OR10P1Q8NGE3 313 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 MYOZ3Q8TDC0 251 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 SCARB1Q8WTV0 552 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 SLC35E1Q96K37 410 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 SLC25A31Q9H0C2 315 aa9.56□□□□□ -0.88
TRAIP-209ENST00000488860 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
TRAIP-209ENST00000488860 LGALS1P09382 135 aaKnown RBP9.55□□□□□ -0.88
TRAIP-209ENST00000488860 SLC25A4P12235 298 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms