RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 STHQ8IWL8 128 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 DUSP18Q8NEJ0 188 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 ST8SIA2Q92186 375 aa13.87□□□□□ -0.19
GGPS1-206ENST00000488594 FAM212BQ9NTI7 297 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-206ENST00000488594 KIAA1109Q2LD37 5005 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 MEIS3P1A6NDR6 274 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 XRCC3O43542 346 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 MIFP14174 115 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 S100GP29377 79 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 RFX2P48378 723 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 RPL11P62913 178 aaKnown RBP13.86□□□□□ -0.19
GGPS1-206ENST00000488594 TOMM20LQ6UXN7 152 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 TMEM231Q9H6L2 316 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 RAB26Q9ULW5 256 aa13.86□□□□□ -0.19
GGPS1-206ENST00000488594 NPBWR1P48145 328 aa13.85□□□□□ -0.19
GGPS1-206ENST00000488594 PRCDQ00LT1 54 aa13.85□□□□□ -0.19
GGPS1-206ENST00000488594 OR5H2Q8NGV7 314 aa13.85□□□□□ -0.19
GGPS1-206ENST00000488594 OR6F1Q8NGZ6 308 aa13.85□□□□□ -0.19
GGPS1-206ENST00000488594 OR4A16Q8NH70 328 aa13.85□□□□□ -0.19
GGPS1-206ENST00000488594 PINX1Q96BK5 328 aaKnown RBP13.85□□□□□ -0.19
GGPS1-206ENST00000488594 ANAPC10Q9UM13 185 aa13.85□□□□□ -0.19
GGPS1-206ENST00000488594 TRAV10A0A0B4J240 114 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 IGHV4-28A0A0C4DH34 117 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 PMP2P02689 132 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 SPP1P10451 314 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 ERHP84090 104 aaKnown RBP13.84□□□□□ -0.19
GGPS1-206ENST00000488594 LPCAT3Q6P1A2 487 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 MORN3Q6PF18 240 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-206ENST00000488594 H2BFWTQ7Z2G1 175 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 S100A16Q96FQ6 103 aaKnown RBP13.84□□□□□ -0.19
GGPS1-206ENST00000488594 VPS13DQ5THJ4 4388 aa13.84□□□□□ -0.19
GGPS1-206ENST00000488594 IGHV3-48P01763 117 aa13.83□□□□□ -0.19
GGPS1-206ENST00000488594 HLA-DMBP28068 263 aa13.83□□□□□ -0.19
GGPS1-206ENST00000488594 ZNF600Q6ZNG1 722 aa13.83□□□□□ -0.19
GGPS1-206ENST00000488594 LILRB2Q8N423 598 aa13.83□□□□□ -0.19
GGPS1-206ENST00000488594 FXYD6Q9H0Q3 95 aa13.83□□□□□ -0.19
GGPS1-206ENST00000488594 IGHV4-4A0A075B6R2 117 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 LOC100506127A0A0U1RQW1 187 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 APOHP02749 345 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-206ENST00000488594 RBMY1A1P0DJD3 496 aaKnown RBP13.83□□□□□ -0.2
GGPS1-206ENST00000488594 RBMY1CP0DJD4 496 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 NAT1P18440 290 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 HSPE1P61604 102 aaKnown RBP13.83□□□□□ -0.2
GGPS1-206ENST00000488594 RBMY1FQ15415 496 aaKnown RBP13.83□□□□□ -0.2
GGPS1-206ENST00000488594 TRPT1Q86TN4 253 aaKnown RBP13.83□□□□□ -0.2
GGPS1-206ENST00000488594 FAM24BQ8N5W8 94 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 SEC22AQ96IW7 307 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 RNF126Q9BV68 326 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 RNF167Q9H6Y7 350 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 ZFAND3Q9H8U3 227 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 RABAC1Q9UI14 185 aa13.83□□□□□ -0.2
GGPS1-206ENST00000488594 PUS1Q9Y606 427 aaKnown RBP eCLIP13.83□□□□□ -0.2
GGPS1-206ENST00000488594 IGHV3-66A0A0C4DH42 116 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 A0A1W2PS18 150 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 ZNF705EA8MWA4 302 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-206ENST00000488594 GIG44P09565 113 aaPredicted RBP13.82□□□□□ -0.2
GGPS1-206ENST00000488594 MED14OSP0DP75 135 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 PHLDA2Q53GA4 152 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 Q6ZTC4 211 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 CROCCP3Q8IVE0 287 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 GRAMD2BQ96HH9 432 aa13.82□□□□□ -0.2
GGPS1-206ENST00000488594 NPPCP23582 126 aa13.81□□□□□ -0.2
GGPS1-206ENST00000488594 TMEM69Q5SWH9 247 aa13.81□□□□□ -0.2
GGPS1-206ENST00000488594 PVRIGQ6DKI7 326 aa13.81□□□□□ -0.2
GGPS1-206ENST00000488594 HRH1P35367 487 aa13.8□□□□□ -0.2
GGPS1-206ENST00000488594 UBE2NLQ5JXB2 153 aa13.8□□□□□ -0.2
GGPS1-206ENST00000488594 TBC1D26Q86UD7 250 aa13.8□□□□□ -0.2
GGPS1-206ENST00000488594 YTHDF1Q9BYJ9 559 aaKnown RBP13.8□□□□□ -0.2
GGPS1-206ENST00000488594 A0A1B0GU03 582 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 A0A1B0GVY2 172 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 K7EQG2 157 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 CORTO00230 105 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 TMEM50AO95807 157 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 SNCAP37840 140 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 TAS2R20P59543 309 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 MRGPRFQ96AM1 343 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 METTL26Q96S19 204 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 X6R8D5 127 aa13.79□□□□□ -0.2
GGPS1-206ENST00000488594 INS-IGF2F8WCM5 200 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 SCGB2A1O75556 95 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 IGKV1-39P01597 117 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 AMBPP02760 352 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 IGKV1D-39P04432 117 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 C4BPBP20851 252 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 PRSS3P35030 304 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 TSPAN5P62079 268 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 KCTD21Q4G0X4 260 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 LYSMD2Q8IV50 215 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 STXBP6Q8NFX7 210 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 NARS2Q96I59 477 aaKnown RBP13.78□□□□□ -0.2
GGPS1-206ENST00000488594 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
GGPS1-206ENST00000488594 ELOA3CA0A087WX78 387 aaPredicted RBP13.77□□□□□ -0.21
GGPS1-206ENST00000488594 P0DMU3 169 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 FAM231AP0DMU4 169 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 FAM231CP0DMU5 169 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 CRYBB3P26998 211 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 HLA-DMAP28067 261 aa13.77□□□□□ -0.21
GGPS1-206ENST00000488594 EIF2B2P49770 351 aaKnown RBP13.77□□□□□ -0.21
GGPS1-206ENST00000488594 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■■■ 30.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms